Crystallization and preliminary X-ray crystallographic analysis of eIF5BΔN and the eIF5BΔN-eIF1AΔN complex. (Q42000273)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

title

Crystallization and preliminary X-ray crystallographic analysis of eIF5BΔN and the eIF5BΔN-eIF1AΔN complex (English)

1 reference

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2 February 2020

1

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2 February 2020

author name string

Reo Yamamoto

2

1 reference

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2 February 2020

Masaaki Sokabe

3

1 reference

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2 February 2020

Isao Tanaka

4

1 reference

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2 February 2020

Min Yao

5

1 reference

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2 February 2020

language of work or name

1 reference

26 May 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

Acta Crystallographica Section F: Structural Biology Communications

2 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

volume

67

1 reference

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2 February 2020

issue

Pt 6

1 reference

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2 February 2020

page(s)

730-733

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

REFMAC5 for the refinement of macromolecular crystal structures

2 February 2020

cites work

1 reference

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5 June 2018

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Features and development of Coot

5 June 2018

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Experimental phasing with SHELXC/D/E: combining chain tracing with density modification

5 June 2018

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

5 June 2018

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The mechanism of eukaryotic translation initiation and principles of its regulation

5 June 2018

1 reference

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Molecular replacement with MOLREP

5 June 2018

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GTP hydrolysis by IF2 guides progression of the ribosome into elongation

5 June 2018

1 reference

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Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing.

5 June 2018

1 reference

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Position of eukaryotic initiation factor eIF5B on the 80S ribosome mapped by directed hydroxyl radical probing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Coupled release of eukaryotic translation initiation factors 5B and 1A from 80S ribosomes following subunit joining.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Interaction between eukaryotic initiation factors 1A and 5B is required for efficient ribosomal subunit joining.

5 June 2018

1 reference

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LAFIRE: software for automating the refinement process of protein-structure analysis.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

The cryo-EM structure of a translation initiation complex from Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

The molecular mechanics of eukaryotic translation

5 June 2018

1 reference

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Mapping the binding interface between human eukaryotic initiation factors 1A and 5B: a new interaction between old partners

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Crystal structure of an initiation factor bound to the 30S ribosomal subunit

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Physical and functional interaction between the eukaryotic orthologs of prokaryotic translation initiation factors IF1 and IF2

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Maximum-likelihood density modification

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

The eIF1A solution structure reveals a large RNA-binding surface important for scanning function

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

The joining of ribosomal subunits in eukaryotes requires eIF5B.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Universal conservation in translation initiation revealed by human and archaeal homologs of bacterial translation initiation factor IF2

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Automated MAD and MIR structure solution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Eukaryotic ribosomes require initiation factors 1 and 1A to locate initiation codons

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Promotion of met-tRNAiMet binding to ribosomes by yIF2, a bacterial IF2 homolog in yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Solvent content of protein crystals

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Single-wavelength anomalous diffraction phasing revisited

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3107155

Processing of X-ray diffraction data collected in oscillation mode

18 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1107%2FS1744309111015910

Direct cross-links between initiation factors 1, 2, and 3 and ribosomal proteins promoted by 2-iminothiolane

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21636924

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1107/S1744309111015910

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21636924%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

21636924

1 reference