OMIGA: Optimized Maker-Based Insect Genome Annotation (Q42004536)

15 October 2017

title

OMIGA: Optimized Maker-Based Insect Genome Annotation (English)

1 reference

15 October 2017

1 reference

Jinding Liu

1

1 reference

15 October 2017

Huamei Xiao

series ordinal

2

1 reference

15 October 2017

Shuiqing Huang

series ordinal

3

1 reference

15 October 2017

Fei Li

series ordinal

4

1 reference

15 October 2017

publication date

9 March 2014

1 reference

Molecular Genetics and Genomics

15 October 2017

published in

1 reference

15 October 2017

volume

289

1 reference

15 October 2017

issue

4

1 reference

15 October 2017

page(s)

567-573

1 reference

The genome sequence of Drosophila melanogaster

15 October 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Ab initio gene identification: prokaryote genome annotation with GeneScan and GLIMMER.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Automated de novo identification of repeat sequence families in sequenced genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Creating a honey bee consensus gene set

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

The Genome Sequence of the Malaria Mosquito Anopheles gambiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

The genome of a lepidopteran model insect, the silkworm Bombyx mori

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Gene finding in novel genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

GeneMark.hmm: new solutions for gene finding

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Computer programs for eukaryotic gene prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

De novo identification of repeat families in large genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Gene identification in bacterial and organellar genomes using GeneScan

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

The genome of the model beetle and pest Tribolium castaneum

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Creating a buzz about insect genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Automated generation of heuristics for biological sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Draft genome of the red harvester ant Pogonomyrmex barbatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Using and understanding RepeatMasker.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

TopHat: discovering splice junctions with RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

A draft sequence for the genome of the domesticated silkworm (Bombyx mori).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Computational inference of homologous gene structures in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

A heterozygous moth genome provides insights into herbivory and detoxification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

MonarchBase: the monarch butterfly genome database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

The monarch butterfly genome yields insights into long-distance migration

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0831-7

Cultivating a Demand for Clean Cookstoves

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24609470

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00438-014-0831-7

1 reference

15 October 2017

1 reference