Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil (Q42118455)

16 October 2017

Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil (English)

1 reference

16 October 2017

1 reference

Juan Luis Ramos Martín

8

1 reference

16 October 2017

Pieter van Dillewijn

3

0 references

Estrella Duque

Estrella Duque

7

0 references

Jennifer Solano

4

Jennifer Solano

1 reference

16 October 2017

Adela García-Salamanca

1

Adela García-Salamanca

1 reference

16 October 2017

Paloma Pizarro-Tobías

5

Paloma Pizarro-Tobías

1 reference

16 October 2017

M Antonia Molina-Henares

2

1 reference

16 October 2017

Amalia Roca

6

1 reference

16 October 2017

6 August 2012

1 reference

16 October 2017

Microbial Biotechnology

1 reference

16 October 2017

6

1 reference

16 October 2017

1

1 reference

16 October 2017

36-44

1 reference

Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain).

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Exploration of hitherto-uncultured bacteria from the rhizosphere

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Selective progressive response of soil microbial community to wild oat roots

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Distantly sampled soils carry few species in common.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Pyrosequencing enumerates and contrasts soil microbial diversity

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Catabolism of phenylalanine by Pseudomonas putida: the NtrC-family PhhR regulator binds to two sites upstream from the phhA gene and stimulates transcription with sigma70.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Perception and modification of plant flavonoid signals by rhizosphere microorganisms.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Toward a more robust assessment of intraspecies diversity, using fewer genetic markers

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Phylogenetic comparisons of bacterial communities from serpentine and nonserpentine soils

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

The influence of tropical plant diversity and composition on soil microbial communities

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

The diversity and biogeography of soil bacterial communities

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Impact of plant species and site on rhizosphere-associated fungi antagonistic to Verticillium dahliae kleb

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

ARB: a software environment for sequence data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

The Uncultured Microbial Majority

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Estimating prokaryotic diversity and its limits

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Temporal changes in archaeal diversity and chemistry in a mid-ocean ridge subseafloor habitat

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Expression of a Pseudomonas putida aminotransferase involved in lysine catabolism is induced in the rhizosphere

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Galactosides in the rhizosphere: utilization by Sinorhizobium meliloti and development of a biosensor.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Control of expression of divergent Pseudomonas putida put promoters for proline catabolism

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Simultaneous detection of the establishment of seed-inoculated Pseudomonas fluorescens strain DR54 and native soil bacteria on sugar beet root surfaces using fluorescence antibody and in situ hybridization techniques

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

A molecular view of microbial diversity and the biosphere

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Estimating terrestrial biodiversity through extrapolation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Estimating species richness using the jackknife procedure.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Genetic diversity in Sargasso Sea bacterioplankton

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Archaea in coastal marine environments

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Extracellular enzymes in soil

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Structure and activity of the bacterial community in the rhizosphere of different plant species and the effect of arbuscular mycorrhizal colonisation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Bulk soil and rhizosphere bacterial community PCR-DGGE profiles and beta-galactosidase activity as indicators of biological quality in soils contaminated by heavy metals and cultivated with Silene vulgaris (Moench) Garcke.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Plant host habitat and root exudates shape soil bacterial community structure

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Plant-soil microorganism interactions: heritable relationship between plant genotype and associated soil microorganisms.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Bacterial Diversity in Shallow Oligotrophic Marine Benthos and Overlying Waters: Effects of Virus Infection, Containment, and Nutrient Enrichment

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Type III secretion in plant growth-promoting Pseudomonas fluorescens SBW25.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Changes in the community structure of ammonia-oxidizing bacteria during secondary succession of calcareous grasslands

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815383

Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use

17 August 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Soil microbial community structure and biomass as affected by Pinus pinea plantation in two Mediterranean areas

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Population differentiation without speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Structure of the Microbial Communities in Coniferous Forest Soils in Relation to Site Fertility and Stand Development Stage

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Bacterial diversity of soils assessed by DGGE, T-RFLP and SSCP fingerprints of PCR-amplified 16S rRNA gene fragments: Do the different methods provide similar results?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Structure and activity of the bacterial community in the rhizosphere of different plant species and the effect of arbuscular mycorrhizal colonisation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

PLANT DIVERSITY, SOIL MICROBIAL COMMUNITIES, AND ECOSYSTEM FUNCTION: ARE THERE ANY LINKS?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Variation of Microbial Rhizosphere Communities in Response to Crop Species, Soil Origin, and Inoculation with Sinorhizobium meliloti L33

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Long-term effects of municipal solid waste compost application on soil enzyme activities and microbial biomass

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Root Interactions with Soil Microbial Communities and Processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Secretion activity of white lupin’s cluster roots influences bacterial abundance, function and community structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1751-7915.2012.00358.X

Root colonization by Pseudomonas putida: love at first sight

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22883414

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Spatial Homogeneity of Abundant Bacterial 16S rRNA Molecules in Grassland Soils

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22883414

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comparison of prokaryotic diversity at offshore oceanic locations reveals a different microbiota in the Mediterranean Sea

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22883414

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/J.1751-7915.2012.00358.X

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

22883414

1 reference