Complete genome sequence of the bacterium Porphyromonas gingivalis TDC60, which causes periodontal disease. (Q42120475)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21705612%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

title

Complete genome sequence of the bacterium Porphyromonas gingivalis TDC60, which causes periodontal disease (English)

1 reference

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6 February 2020

main subject

Porphyromonas gingivalis

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genomics

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whole genome sequencing

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1

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6 February 2020

Fumito Maruyama

2

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6 February 2020

7

Kenshiro Oshima

1 reference

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6 February 2020

9

Masahira Hattori

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6 February 2020

author name string

Takashi Nozawa

3

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6 February 2020

Akinobu Aoki

4

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6 February 2020

Soichiro Okano

5

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6 February 2020

Yasuko Shibata

6

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6 February 2020

Ken Kurokawa

8

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6 February 2020

Ichiro Nakagawa

10

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6 February 2020

Yoshimitsu Abiko

11

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6 February 2020

language of work or name

1 reference

24 June 2011

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6 February 2020

published in

Journal of Bacteriology

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6 February 2020

volume

193

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6 February 2020

issue

16

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6 February 2020

page(s)

4259-4260

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MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

6 February 2020

cites work

1 reference

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MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi

29 May 2018

1 reference

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MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes

29 May 2018

1 reference

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GenomeMatcher: a graphical user interface for DNA sequence comparison

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147703

Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147703

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

29 May 2018

1 reference

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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

29 May 2018

1 reference

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ISfinder: the reference centre for bacterial insertion sequences

29 May 2018

1 reference

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Rfam: annotating non-coding RNAs in complete genomes

29 May 2018

1 reference

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Mauve: multiple alignment of conserved genomic sequence with rearrangements

29 May 2018

1 reference

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Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83

29 May 2018

1 reference

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Improved microbial gene identification with GLIMMER

29 May 2018

1 reference

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Comparative genomics of BCG vaccines by whole-genome DNA microarray

29 May 2018

1 reference

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

29 May 2018

1 reference

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Microbial etiological agents of destructive periodontal diseases

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3147703

17 August 2018

Identifiers

DOI

10.1128/JB.05269-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21705612%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21705612%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

PubMed publication ID

21705612

1 reference