Transcriptomic insights into the physiology of Aspergillus niger approaching a specific growth rate of zero (Q42120698)

16 October 2017

Transcriptomic insights into the physiology of Aspergillus niger approaching a specific growth rate of zero (English)

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Putative catalase-peroxidase

16 October 2017

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5 February 2019

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5 February 2019

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5 February 2019

Putative transcription factor similar to A. nidulans abaA

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Putative DNA primase, large subunit

5 February 2019

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Myb-like DNA-binding protein

5 February 2019

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Transcription regulator similar to A. nidulans wetA

5 February 2019

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Putative isocitrate lyase

5 February 2019

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Putative transcription factor similar to A. nidulans brlA

5 February 2019

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Laccase-like multicopper oxidase

5 February 2019

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Putative transcription factor similar to A. nidulans medA (medusa)

5 February 2019

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Putative condensin-complex subunit

5 February 2019

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Putative regulator of G-protein signaling protein

5 February 2019

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Putative C2H2 transcription factor

5 February 2019

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Putative endochitinase, class V

5 February 2019

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Putative trehalose phosphorylase with similarity to Neurospora crassa ccg9

5 February 2019

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5 February 2019

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5 February 2019

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5 February 2019

Putative ketothiolase

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Putative transcription factor similar to A. nidulans stuA

5 February 2019

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Putative vacuolar serine proteinase

6 February 2019

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Putative woronin body protein

6 February 2019

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Putative autophagy-related ubiquitin modifier

6 February 2019

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Putative histone chaperone FACT subunit

6 February 2019

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Putative chitin synthase, class III

6 February 2019

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Putative polyketide synthase (PKS) involved in both dihydroxynaphthalene (DHN) melanin and naphtho-gamma-pyrone production

6 February 2019

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Putative histidine kinase, two-component system

6 February 2019

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Putative phosphotyrosine phosphatase

6 February 2019

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6 February 2019

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6 February 2019

Putative multicopper oxidase

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Putative regulator of fatty acid catabolism

6 February 2019

1 reference

Putative exo-beta-1,3-glucanase

6 February 2019

1 reference

6 February 2019

Thomas R Jørgensen

1

1 reference

16 October 2017

Benjamin M Nitsche

2

1 reference

16 October 2017

Gerda E Lamers

3

1 reference

16 October 2017

Mark Arentshorst

4

1 reference

16 October 2017

Cees A van den Hondel

5

1 reference

16 October 2017

Arthur F Ram

6

1 reference

16 October 2017

language of work or name

English

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publication date

18 June 2010

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Applied and Environmental Microbiology

16 October 2017

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16 October 2017

76

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16 October 2017

16

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16 October 2017

5344-5355

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Review of secondary metabolites and mycotoxins from the Aspergillus niger group

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

FACT facilitates chromatin transcription by RNA polymerases I and III

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

A gene cluster containing two fungal polyketide synthases encodes the biosynthetic pathway for a polyketide, asperfuranone, in Aspergillus nidulans

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Transcriptional profiling identifies a role for BrlA in the response to nitrogen depletion and for StuA in the regulation of secondary metabolite clusters in Aspergillus fumigatus

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Identification and characterization of the asperthecin gene cluster of Aspergillus nidulans

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Current status of systems biology in Aspergilli

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Upstream and downstream regulation of asexual development in Aspergillus fumigatus

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Feature-based prediction of non-classical and leaderless protein secretion

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

The early impact of genetics on our understanding of cell cycle regulation in Aspergillus nidulans

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

The transcription factor HACA mediates the unfolded protein response in Aspergillus niger, and up-regulates its own transcription

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Biosynthesis of fungal melanins and their importance for human pathogenic fungi

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Regulation of eukaryotic DNA replication at the initiation step

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Metabolic engineering of the morphology of Aspergillus.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Shaping the metaphase chromosome: coordination of cohesion and condensation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Hydrophobins: multipurpose proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

A Pcl-like cyclin of Aspergillus nidulans is transcriptionally activated by developmental regulators and is involved in sporulation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Characterization of a foldase, protein disulfide isomerase A, in the protein secretory pathway of Aspergillus niger

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

A developmentally regulated gene cluster involved in conidial pigment biosynthesis in Aspergillus fumigatus.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Asexual sporulation in Aspergillus nidulans.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Molecular cloning, sequence analysis and expression of the gene encoding an antifungal-protein from Aspergillus giganteus

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

TFIIF-TAF-RNA polymerase II connection

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Kinetics of the nuclear division cycle of Aspergillus nidulans.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Conidiation of Aspergillus niger in continuous culture.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Batch- and continuous-culture transients for two substrate systems

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Modeling of microbial substrate conversion, growth and product formation in a recycling fermentor.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Genetic analysis and the construction of master strains for assignment of genes to six linkage groups in Aspergillus niger

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Developmental repression of growth and gene expression in Aspergillus

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Bioenergetic consequences of glucoamylase production in carbon-limited chemostat cultures of Aspergillus niger

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Determination of the maximum product yield from glucoamylase-producing Aspergillus niger grown in the recycling fermentor

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Cell division in Aspergillus

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

The effect of environmental conditions on extracellular protease activity in controlled fermentations of Aspergillus niger

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Quantitative physiology of Saccharomyces cerevisiae at near-zero specific growth rates.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Pol3 is involved in nonhomologous end-joining in Saccharomyces cerevisiae.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Enhanced citrate production through gene insertion in Aspergillus niger

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Fumonisin B2 production by Aspergillus niger.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Cloning and functional analysis of the Aspergillus oryzae conidiation regulator gene brlA by its disruption and misscheduled expression.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Antioxidant activity of the melanin pigment extracted from Aspergillus nidulans

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Four conserved intramolecular disulphide linkages are required for secretion and cell wall localization of a hydrophobin during fungal morphogenesis

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

The Aspergillus nidulans cyclin PclA accumulates in the nucleus and interacts with the central cell cycle regulator NimX(Cdc2).

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

A novel 'two-component' protein containing histidine kinase and response regulator domains required for sporulation in Aspergillus nidulans.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Growth and product formation in chemostat and recycling cultures by Aspergillus niger N402 and a glucoamylase overproducing transformant, provided with multiple copies of the glaA gene.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Survival in the Presence of Antifungals

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Highly efficient gene targeting in the Aspergillus niger kusA mutant

1 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2918955

Sporulation at minimum specific growth rate in Aspergillus nidulans chemostat culture predicted using protein synthesis efficiency estimations

1 December 2018

1 reference

12 December 2020

Changes in Constituents and Ultrastructure of Hyphal Compartments during Autolysis of Glucose-starved Penicillium chrysogenum

1 reference

12 December 2020

Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics

1 reference

12 December 2020

Organization of the ribosomal RNA gene cluster in Aspergillus nidulans

1 reference

12 December 2020

Starvation stress modulates the expression of the Aspergillus nidulans brlA regulatory gene

1 reference

12 December 2020

Sporulation of Aspergillus niger in Submerged Liquid Culture

1 reference

12 December 2020

Proteins involved in microbody biogenesis and degradation in Aspergillus nidulans

1 reference

12 December 2020

The Influence of Maintenance Energy and Growth Rate on the Metabolic Activity, Morphology and Conidiation of Penicillium chrysogenum

1 reference

12 December 2020

The maintenance energy of bacteria in growing cultures

1 reference

12 December 2020

Organic acid production by Aspergillus niger in recycling culture analyzed by capillary electrophoresis

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.00450-10

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

20562270

1 reference