Savant Genome Browser 2: visualization and analysis for population-scale genomics (Q42126101)

16 October 2017

Savant Genome Browser 2: visualization and analysis for population-scale genomics (English)

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16 October 2017

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7

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16 October 2017

8

Shoshana J Wodak

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Michael Brudno

9

object named as

Michael Brudno

1 reference

16 October 2017

Marc Fiume

1

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16 October 2017

Eric J M Smith

2

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16 October 2017

Andrew Brook

3

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16 October 2017

Dario Strbenac

4

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16 October 2017

Brian Turner

5

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16 October 2017

Aziz M Mezlini

6

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16 October 2017

25 May 2012

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16 October 2017

Nucleic Acids Research

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16 October 2017

40

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16 October 2017

Web Server issue

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16 October 2017

W615-21

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Creative Commons Attribution-NonCommercial 3.0 Unported

16 October 2017

start time

5 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

The variant call format and VCFtools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Integrative genomics viewer

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

A map of human genome variation from population-scale sequencing

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

DAnCER: disease-annotated chromatin epigenetics resource

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Detecting copy number variation with mated short reads

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Savant: genome browser for high-throughput sequencing data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Sensitive and accurate detection of copy number variants using read depth of coverage

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

WikiPathways: pathway editing for the people

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Haploview: analysis and visualization of LD and haplotype maps

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

The UCSC Genome Browser Database

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

The human genome browser at UCSC

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

Gene ontology: tool for the unification of biology

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394255

29 May 2018

Identifiers

DOI

10.1093/NAR/GKS427

1 reference

journals/nar/FiumeSBSTMRWB12

16 October 2017

1 reference

DBLP Dataset 2021-01-02

release_zf6ecmihbjephfzyz65maintv4

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zf6ecmihbjephfzyz65maintv4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

16 October 2017

1 reference