Specialization versus adaptation: two strategies employed by cyanophages to enhance their translation efficiencies (Q42133054)

17 October 2017

Specialization versus adaptation: two strategies employed by cyanophages to enhance their translation efficiencies (English)

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17 October 2017

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4

Yitzhak Pilpel

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17 October 2017

Keren Limor-Waisberg

1

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17 October 2017

Asaf Carmi

series ordinal

2

1 reference

17 October 2017

Avigdor Scherz

series ordinal

3

1 reference

17 October 2017

Itay Furman

series ordinal

5

1 reference

17 October 2017

5 April 2011

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17 October 2017

13

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inferred from page(s)

published in

Nucleic Acids Research

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17 October 2017

39

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17 October 2017

14

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17 October 2017

6016-6028

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Creative Commons Attribution-NonCommercial 2.5 Generic

17 October 2017

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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Virus attenuation by genome-scale changes in codon pair bias

29 May 2018

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29 May 2018

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Patterns and implications of gene gain and loss in the evolution of Prochlorococcus

29 May 2018

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29 May 2018

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29 May 2018

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Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts

29 May 2018

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The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains

29 May 2018

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Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

29 May 2018

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29 May 2018

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Solving the riddle of codon usage preferences: a test for translational selection

29 May 2018

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Genetic organization of the psbAD region in phages infecting marine Synechococcus strains

29 May 2018

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Transfer of photosynthesis genes to and from Prochlorococcus viruses

29 May 2018

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The impact of prophages on bacterial chromosomes

29 May 2018

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Cyanophages infecting the oceanic cyanobacterium Prochlorococcus

29 May 2018

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29 May 2018

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The genome of a motile marine Synechococcus

29 May 2018

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Clustering-based approaches to discovering and visualising microarray data patterns

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29 May 2018

Bacteriophage T4 Genome

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In vivo introduction of unpreferred synonymous codons into the Drosophila Adh gene results in reduced levels of ADH protein

29 May 2018

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tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features

29 May 2018

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Amino acid acceptor activity of bacteriophage T4 transfer RNA.

29 May 2018

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Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences.

29 May 2018

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Codon bias at the 3'-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli

29 May 2018

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Pathogenicity islands and the evolution of microbes

29 May 2018

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Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis

29 May 2018

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Prochlorococcus, a marine photosynthetic prokaryote of global significance

29 May 2018

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Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes

29 May 2018

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29 May 2018

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A role for bacteriophages in the evolution and transfer of bacterial virulence determinants

29 May 2018

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Cyanobacterial community structure as seen from RNA polymerase gene sequence analysis

29 May 2018

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Codon--anticodon pairing: the wobble hypothesis

29 May 2018

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Bacteriophage induced transfer RNA in Escherichia coli. New transfer RNA molecules are synthesized on the bacteriophage genome

29 May 2018

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The induction of tRNA synthesis following T4 phage infection

29 May 2018

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Transfer RNA coded by the T4 bacteriophage genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Function of the bacteriophage T4 transfer RNA's

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Chromosomal insertion sites for phages and plasmids

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence of Synechococcus host genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Prevalence of highly host-specific cyanophages in the estuarine environment.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Whole genome sequencing of a novel temperate bacteriophage of P. aeruginosa: evidence of tRNA gene mediating integration of the phage genome into the host bacterial chromosome.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Base composition bias might result from competition for metabolic resources.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152331

Exploring the regulation of tRNA distribution on the genomic scale

17 August 2018

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12 December 2020

Functional role of mycobacteriophage transfer RNAs

1 reference

12 December 2020

Synonymous codon preferences in bacteriophage T4: A distinctive use of transfer RNAs from T4 and from its host Escherichia coli

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12 December 2020

Selection on codon usage for error minimization at the protein level

1 reference

12 December 2020

Potential photosynthesis gene recombination between Prochlorococcus and Synechococcus via viral intermediates

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKR169

1 reference

17 October 2017

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17 October 2017

PubMed publication ID

21470965

1 reference