Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA. (Q42174964)

18 October 2017

Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA. (English)

1 reference

18 October 2017

1

Roger Pique-Regi

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Shahab Asgharzadeh

object named as

Shahab Asgharzadeh

series ordinal

3

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author name string

Antonio Ortega

series ordinal

2

1 reference

PMC publication ID

2732310

18 October 2017

language of work or name

English

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publication date

10 March 2009

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18 October 2017

1 reference

18 October 2017

25

1 reference

18 October 2017

10

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18 October 2017

1223-1230

1 reference

Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms

18 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Integrated detection and population-genetic analysis of SNPs and copy number variation

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

The fine-scale and complex architecture of human copy-number variation

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Sparse representation and Bayesian detection of genome copy number alterations from microarray data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Breaking the waves: improved detection of copy number variation from microarray-based comparative genomic hybridization.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Global variation in copy number in the human genome

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Copy number variation: new insights in genome diversity

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Structural variation in the human genome

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

A comparison study: applying segmentation to array CGH data for downstream analyses

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Detection of large-scale variation in the human genome

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

Estimation and assessment of raw copy numbers at the single locus level

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732310

10.1093/BIOINFORMATICS/BTP119

17 August 2018

Identifiers

DOI

1 reference

journals/bioinformatics/Pique-RegiOA09

18 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

2732310

18 October 2017

PubMed publication ID

19276152

1 reference

PMC publication ID

2732310