Evolutionary analysis identifies an MX2 haplotype associated with natural resistance to HIV-1 infection. (Q42210416)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

Evolutionary analysis identifies an MX2 haplotype associated with natural resistance to HIV-1 infection (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Mario Clerici

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Manuela Sironi

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Mara Biasin

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Rachele Cagliani

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Daria Lucia Trabattoni

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Diego Forni

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Chiara Pontremoli

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Uberto Pozzoli

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Antonio Rivero-Juarez

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Antonio Caruz

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

4

Federica Gnudi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

5

Irma Saulle

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

9

Claudia Tresoldi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

12

Luca De Gioia

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

author name string

Salomè Ibba

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Giulia Filippi

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Sarah Yahyaei

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Stefania Riva

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Sergio Lo Caputo

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

Francesco Mazzotta

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

language of work or name

1 reference

14 June 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

Molecular Biology and Evolution

20 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

volume

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

page(s)

2402-2414

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24930137%20AND%20SRC:MED&resulttype=core&format=json

A map of human genome variation from population-scale sequencing

20 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Accuracy and power of bayes prediction of amino acid sites under positive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Endoplasmic reticulum aminopeptidase 2 haplotypes play a role in modulating susceptibility to HIV infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

GeCo++: a C++ library for genomic features computation and annotation in the presence of variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Rules of engagement: molecular insights from host-virus arms races

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

An integrated encyclopedia of DNA elements in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Comparative protein structure modeling using Modeller

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A 175 million year history of T cell regulatory molecules reveals widespread selection, with adaptive evolution of disease alleles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

An evolutionary analysis of antigen processing and presentation across different timescales reveals pervasive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Parasites represent a major selective force for interleukin genes and shape the genetic predisposition to autoimmune conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Structure of myxovirus resistance protein a reveals intra- and intermolecular domain interactions required for the antiviral function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Identifying recent adaptations in large-scale genomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Estimating maximum likelihood phylogenies with PhyML.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Human MxA protein: an interferon-induced dynamin-like GTPase with broad antiviral activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

MX2 is an interferon-induced inhibitor of HIV-1 infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Inhibition of nuclear import and cell-cycle progression by mutated forms of the dynamin-like GTPase MxB

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Not so different after all: a comparison of methods for detecting amino acid sites under selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A random effects branch-site model for detecting episodic diversifying selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Automated phylogenetic detection of recombination using a genetic algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A genome-wide association study of resistance to HIV infection in highly exposed uninfected individuals with hemophilia A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Worldwide human relationships inferred from genome-wide patterns of variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Multicohort genomewide association study reveals a new signal of protection against HIV-1 acquisition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Interferon-inducible cholesterol-25-hydroxylase broadly inhibits viral entry by production of 25-hydroxycholesterol

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Systematic identification of type I and type II interferon-induced antiviral factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

The interferon-inducible MxB protein inhibits HIV-1 infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A genetic polymorphism of FREM1 is associated with resistance against HIV infection in the Pumwani sex worker cohort

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

The PSIPRED protein structure prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Evolution-guided identification of antiviral specificity determinants in the broadly acting interferon-induced innate immunity factor MxA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Detecting individual sites subject to episodic diversifying selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

The geographic spread of the CCR5 Delta32 HIV-resistance allele

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Antiretroelement activity of APOBEC3H was lost twice in recent human evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

PLINK: a tool set for whole-genome association and population-based linkage analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Alzheimer disease susceptibility loci: evidence for a protein network under natural selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Missorting of LaCrosse virus nucleocapsid protein by the interferon-induced MxA GTPase involves smooth ER membranes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

I-TASSER: a unified platform for automated protein structure and function prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A single nucleotide polymorphism of porcine MX2 gene provides antiviral activity against vesicular stomatitis virus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Libsequence: a C++ class library for evolutionary genetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Mx proteins: antiviral gatekeepers that restrain the uninvited

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

VADAR: a web server for quantitative evaluation of protein structure quality

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A population genetics-phylogenetics approach to inferring natural selection in coding sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Genetical structure of populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

PAML 4: phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Synonymous and nonsynonymous rate variation in nuclear genes of mammals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Bayes empirical bayes inference of amino acid sites under positive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

I-TASSER server for protein 3D structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

Evolutionary and functional analysis of celiac risk loci reveals SH2B3 as a protective factor against bacterial infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

The ‘immunologic advantage’ of HIV-exposed seronegative individuals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193

A Common Polymorphism in TLR3 Confers Natural Resistance to HIV-1 Infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSU193