TCR repertoire analysis by next generation sequencing allows complex differential diagnosis of T cell-related pathology. (Q42270935)

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20 February 2020

title

TCR repertoire analysis by next generation sequencing allows complex differential diagnosis of T cell-related pathology (English)

1 reference

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20 February 2020

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9

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20 February 2020

Ulrik Stervbo

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20 February 2020

Hans-Dieter Volk

11

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20 February 2020

Petra Reinke

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20 February 2020

author name string

M Dziubianau

1

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20 February 2020

J Hecht

2

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20 February 2020

L Kuchenbecker

3

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20 February 2020

A Sattler

4

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20 February 2020

C Rödelsperger

6

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20 February 2020

P Nickel

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20 February 2020

A U Neumann

8

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20 February 2020

S Mundlos

10

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20 February 2020

A Thiel

12

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20 February 2020

N Babel

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language of work or name

English

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publication date

10 September 2013

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American Journal of Transplantation

20 February 2020

published in

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volume

13

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20 February 2020

issue

11

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20 February 2020

page(s)

2842-2854

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describes a project that uses

20 February 2020

massive parallel sequencing

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based on heuristic

inferred from title

cites work

Management of infectious complications in solid-organ transplant recipients

1 reference

Direct measurement of T-cell receptor repertoire diversity with AmpliCot

21 January 2018

1 reference

Recombination centres and the orchestration of V(D)J recombination

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A direct estimate of the human alphabeta T cell receptor diversity

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A mechanism for TCR sharing between T cell subsets and individuals revealed by pyrosequencing

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Direct link between mhc polymorphism, T cell avidity, and diversity in immune defense

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Functional implications of T cell receptor diversity

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T cell receptor αβ diversity inversely correlates with pathogen-specific antibody levels in human cytomegalovirus infection

21 January 2018

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Fixing an irrelevant TCR alpha chain reveals the importance of TCR beta diversity for optimal TCR alpha beta pairing and function of virus-specific CD8+ T cells.

21 January 2018

1 reference

Next-generation DNA sequencing methods

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Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing

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Comprehensive assessment of T-cell receptor beta-chain diversity in alphabeta T cells

21 January 2018

1 reference

Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing

21 January 2018

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Novel approach for improved assessment of phenotypic and functional characteristics of BKV-specific T-cell immunity

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Circulating alloreactive T cells correlate with graft function in longstanding renal transplant recipients

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Direct access to CD4+ T cells specific for defined antigens according to CD154 expression.

21 January 2018

1 reference

Activation-induced expression of CD137 permits detection, isolation, and expansion of the full repertoire of CD8+ T cells responding to antigen without requiring knowledge of epitope specificities

21 January 2018

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HLA type-independent method to monitor polyoma BK virus-specific CD4 and CD8 T-cell immunity

21 January 2018

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Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis

21 January 2018

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IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs

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Model for comparative analysis of antigen receptor repertoires

21 January 2018

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Method for assessing the similarity between subsets of the T cell receptor repertoire.

21 January 2018

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Clonotype analysis of cytomegalovirus-specific cytotoxic T lymphocytes

21 January 2018

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Molecular tracking of an Human Immunodeficiency Virus nef specific cytotoxic T-cell clone shows persistence of clone-specific T-cell receptor DNA but not mRNA following early combination antiretroviral therapy

21 January 2018

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A role for TCR affinity in regulating naive T cell homeostasis.

21 January 2018

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BK polyomavirus infection and nephropathy: the virus-immune system interplay.

21 January 2018

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The case of BK virus infection in which it was difficult to differentiate from acute rejection

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Histological patterns of polyomavirus nephropathy: correlation with graft outcome and viral load

21 January 2018

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BK virus nephropathy and kidney transplantation

21 January 2018

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Immunobiology of human cytomegalovirus: from bench to bedside.

21 January 2018

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Clonotypic structure of the human CD4+ memory T cell response to cytomegalovirus

21 January 2018

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Monitoring the T-cell receptor repertoire at single-clone resolution.

21 January 2018

1 reference

Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes.

21 January 2018

1 reference

Human T-cell memory consists mainly of unexpanded clones.

21 January 2018

1 reference

Ultra-sensitive detection of rare T cell clones.

21 January 2018

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High-throughput VDJ sequencing for quantification of minimal residual disease in chronic lymphocytic leukemia and immune reconstitution assessment

21 January 2018

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Large TCR diversity of virus-specific CD8 T cells provides the mechanistic basis for massive TCR renewal after antigen exposure

21 January 2018

1 reference

Overlap and Effective Size of the Human CD8 + T Cell Receptor Repertoire

21 January 2018

1 reference

Subdominant CD8 T-cell epitopes account for protection against cytomegalovirus independent of immunodomination

21 January 2018

1 reference

Single cell analysis reveals similar functional competence of dominant and nondominant CD8 T-cell clonotypes

21 January 2018

1 reference

Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses

21 January 2018

1 reference

Antigen-driven T-cell repertoire selection.

21 January 2018

1 reference

Sculpting the immunological response to dengue fever by polytopic vaccination

21 January 2018

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Two overlapping subdominant epitopes identified by DNA immunization induce protective CD8(+) T-cell populations with differing cytolytic activities

21 January 2018

1 reference

Immunodominance and immunodomination: critical factors in developing effective CD8+ T-cell-based cancer vaccines

21 January 2018

1 reference

Analysis of CD8 T cell reactivity to cytomegalovirus using protein-spanning pools of overlapping pentadecapeptides

21 January 2018

1 reference

Broadly targeted human cytomegalovirus-specific CD4+ and CD8+ T cells dominate the memory compartments of exposed subjects

21 January 2018

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Induction and evolution of cytomegalovirus-specific CD4+ T cell clonotypes in rhesus macaques.

21 January 2018

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Polyomavirus-associated nephropathy in renal transplantation: critical issues of screening and management

21 January 2018

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21 January 2018

Identifiers

DOI

10.1111/AJT.12431

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24020931%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

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