Computational design of a collagen A:B:C-type heterotrimer (Q42325657)

26 October 2017

Computational design of a collagen A:B:C-type heterotrimer (English)

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26 October 2017

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1

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26 October 2017

4

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26 October 2017

Sohail Zahid

2

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26 October 2017

Teresita Silva

series ordinal

3

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26 October 2017

language of work or name

English

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publication date

14 September 2011

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Journal of the American Chemical Society

26 October 2017

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26 October 2017

133

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26 October 2017

39

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26 October 2017

15260-15263

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The contribution of interchain salt bridges to triple-helical stability in collagen.

26 October 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

A Synthetic Coiled-Coil Interactome Provides Heterospecific Modules for Molecular Engineering

29 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

De novo self-assembling collagen heterotrimers using explicit positive and negative design

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Synthetic collagen heterotrimers: structural mimics of wild-type and mutant collagen type I.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Surprisingly high stability of collagen ABC heterotrimer: evaluation of side chain charge pairs

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

The collagen family members as cell adhesion proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Improving coiled-coil stability by optimizing ionic interactions

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

From coiled coils to small globular proteins: design of a native-like three-helix bundle

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

A new approach to the design of stable proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Optimal sequence selection in proteins of known structure by simulated evolution

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Crystal and Molecular Structure of a Collagen-Like Peptide at 1.9 Å Resolution

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Energetics of intrachain salt-linkage formation in collagen

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Hydroxyproline content and location in relation to collagen thermal stability

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Structural basis for the varying propensities of different amino acids to adopt the collagen conformation.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Prediction of collagen stability from amino acid sequence

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Automated design of specificity in molecular recognition

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Salt bridges destabilize a leucine zipper designed for maximized ion pairing between helices

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Inter-helical interactions in the leucine zipper coiled coil dimer: pH and salt dependence of coupling energy between charged amino acids

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Protein dissection of the antiparallel coiled coil from Escherichia coli seryl tRNA synthetase.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

A designed heterotrimeric coiled coil

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Computational Design of Intermolecular Stability and Specificity in Protein Self-assembly

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3443875

Self-assembled heterotrimeric collagen triple helices directed through electrostatic interactions

1 December 2018

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12 December 2020

Positive and negative design leads to compositional control in AAB collagen heterotrimers

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12 December 2020

Computational de novo design, and characterization of an A(2)B(2) diiron protein

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12 December 2020

Conformational implications of amino acid sequence regularities in collagen

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12 December 2020

The triple helix in equilibrium with coil conversion of collagen-like polytripeptides in aqueous and nonaqueous solvents. Comparison of the thermodynamic parameters and the binding of water to (L-Pro-L-Pro-Gly)n and (L-Pro-L-Hyp-Gly)n

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12 December 2020

Stabilization of the triple-helical structure of natural collagen by side-chain interactions

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12 December 2020

Electrostatic interactions in collagen-like triple-helical peptides

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12 December 2020

Structure of the type I collagen molecule based on conformational energy computations: the triple-stranded helix and the N-terminal telopeptide

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12 December 2020

Positional preferences of ionizable residues in Gly-X-Y triplets of the collagen triple-helix

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12 December 2020

Identifiers

DOI

10.1021/JA205597G

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26 October 2017

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26 October 2017

PubMed publication ID

21902217

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