cisExpress: motif detection in DNA sequences (Q42550262)

2 November 2017

cisExpress: motif detection in DNA sequences (English)

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2 November 2017

Martin Triska

1

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2 November 2017

David Grocutt

2

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2 November 2017

James Southern

3

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2 November 2017

Denis J Murphy

4

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2 November 2017

Tatiana Tatarinova

5

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2 November 2017

language of work or name

English

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publication date

21 June 2013

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2 November 2017

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2 November 2017

29

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2 November 2017

17

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2 November 2017

2203-2205

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Evaluation of methods for modeling transcription factor sequence specificity

2 November 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Identification of the MBF1 heat-response regulon of Arabidopsis thaliana

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

The diversity of plant heat stress transcription factors

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Statistical mechanical modeling of genome-wide transcription factor occupancy data by MatrixREDUCE.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

A survey of motif discovery methods in an integrated framework

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

A gene expression map of Arabidopsis thaliana development

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Genome wide analysis of Arabidopsis core promoters

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Assessing computational tools for the discovery of transcription factor binding sites

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Genome-wide discovery of cis-elements in promoter sequences using gene expression

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3740630

10.1093/BIOINFORMATICS/BTT366

16 August 2018

Identifiers

DOI

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journals/bioinformatics/TriskaGSMT13

2 November 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 November 2017

1 reference