DNA supercoiling response of the σ54-dependent Klebsiella pneumoniae nifL promoter in vitro (Q42611490)

reason for preferred rank

3 November 2017

DNA supercoiling response of the σ54-dependent Klebsiella pneumoniae nifL promoter in vitro (English)

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

13 October 2022

DNA supercoiling response of the sigma 54-dependent Klebsiella pneumoniae nifL promoter in vitro (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

main subject

Klebsiella pneumoniae

0 references

DNA supercoil

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

bacterial genes

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

promoter

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

13 October 2022

3

R. Dixon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

author name string

S. Whitehall

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

S. Austin

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1602472

13 October 2022

language of work or name

English

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publication date

1 June 1992

1 reference

3 November 2017

5 June 1992

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1602472

full work available at URL

13 October 2022

number of pages

17

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based on heuristic

inferred from page(s)

https://api.elsevier.com/content/article/PII:002228369290388Z?httpAccept=text/xml

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https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

https://api.elsevier.com/content/article/PII:002228369290388Z?httpAccept=text/plain

13 October 2022

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Journal of Molecular Biology

13 October 2022

published in

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3 November 2017

225

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3 November 2017

3

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3 November 2017

591-607

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The prokaryotic enhancer binding protein NTRC has an ATPase activity which is phosphorylation and DNA dependent

3 November 2017

1

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Requirements for transcriptional activation in vitro of the nitrogen-regulated glnA and nifLA promoters from Klebsiella pneumoniae: dependence on activator concentration

13 October 2022

2

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Influence of a mutation in the putative nucleotide binding site of the nitrogen regulatory protein NTRC on its positive control function

13 October 2022

3

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Use of site-specific recombination as a probe of DNA structure and metabolism in vivo

13 October 2022

4

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Supercoiling response of the lac ps promoter in vitro

13 October 2022

5

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

High-resolution analysis of lac transcription complexes inside cells.

13 October 2022

6

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

All three elements of the lac ps promoter mediate its transcriptional response to DNA supercoiling

13 October 2022

7

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

DNA supercoiling promotes formation of a bent repression loop in lac DNA.

13 October 2022

8

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

A complementation analysis of the restriction and modification of DNA in Escherichia coli

13 October 2022

10

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Activation and inhibition of transcription by supercoiling

13 October 2022

11

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Mutations in the RNA polymerase recognition sequence of the Klebsiella pneumoniae nifH promoter permitting transcriptional activation in the absence of NifA binding to upstream activator sequences.

13 October 2022

12

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Site-directed mutagenesis of the Klebsiella pneumoniae nifL and nifH promoters and in vivo analysis of promoter activity.

13 October 2022

13

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

13 October 2022

14

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Organization and function of binding sites for the transcriptional activator NifA in the Klebsiella pneumoniae nifE and nifU promoters

13 October 2022

15

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu

13 October 2022

16

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Role of integration host factor in the regulation of the glnHp2 promoter of Escherichia coli

13 October 2022

17

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Tandem promoters determine regulation of the Klebsiella pneumoniae glutamine synthetase (glnA) gene.

13 October 2022

19

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Analysis of regulation of Klebsiella pneumoniae nitrogen fixation (nif) gene cluster with gene fusions

13 October 2022

20

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

DNA supercoiling and aerobic regulation of transcription from the Klebsiella pneumoniae nifLA promoter

13 October 2022

21

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

DNA supercoiling and the anaerobic and growth phase regulation of tonB gene expression.

13 October 2022

22

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Defining a bacteriophage T4 late promoter: absence of a "-35" region.

13 October 2022

25

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling

13 October 2022

26

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Facile cruciform formation by an (A-T)34 sequence from a Xenopus globin gene

13 October 2022

27

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Regulation of nitrogen fixation genes

13 October 2022

28

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transcription of Escherichia coli ara in vitro. The cyclic AMP receptor protein requirement for PBAD induction that depends on the presence and orientation of the araO2 site.

13 October 2022

29

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Interaction of purified NtrC protein with nitrogen regulated promoters from Klebsiella pneumoniae

13 October 2022

30

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons.

13 October 2022

33

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Bacterial DNA supercoiling and [ATP]/[ADP]. Changes associated with a transition to anaerobic growth

13 October 2022

34

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

DNA supercoiling changes the spacing requirement of two lac operators for DNA loop formation with lac repressor.

13 October 2022

38

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Unusual properties of promoter-up mutations in the Escherichia coli galactose operon and evidence suggesting RNA polymerase-induced DNA bending

13 October 2022

40

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro

13 October 2022

43

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Mechanism of CRP-cAMP activation of lac operon transcription initiation activation of the P1 promoter

13 October 2022

45

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Superhelical torsion in cellular DNA responds directly to environmental and genetic factors

13 October 2022

47

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Mechanism and control of transcription initiation in prokaryotes

13 October 2022

48

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

The role of activator binding sites in transcriptional control of the divergently transcribed nifF and nifLA promoters from Klebsiella pneumoniae

13 October 2022

50

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transcriptional activation of the Klebsiella pneumoniae nifLA promoter by NTRC is face-of-the-helix dependent and the activator stabilizes the interaction of sigma 54-RNA polymerase with the promoter.

13 October 2022

51

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex

13 October 2022

52

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

An overlap between osmotic and anaerobic stress responses: a potential role for DNA supercoiling in the coordinate regulation of gene expression.

13 October 2022

53

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Initiation of transcription at the bacterial glnAp2 promoter by purified E. coli components is facilitated by enhancers.

13 October 2022

55

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Function of a bacterial activator protein that binds to transcriptional enhancers

13 October 2022

56

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

DNA supercoiling and prokaryotic transcription

13 October 2022

57

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Stabilization of Z DNA in vivo by localized supercoiling.

13 October 2022

58

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter

13 October 2022

59

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Supercoiling is essential for the formation and stability of the initiation complex at the divergent malEp and malKp promoters

13 October 2022

61

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Mapping of SV40 DNA replication origin region binding sites for the SV40 T antigen by protection against exonuclease III digestion

13 October 2022

64

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

The problems of eukaryotic and prokaryotic DNA packaging and in vivo conformation posed by superhelix density heterogeneity

13 October 2022

65

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

RNA polymerase interactions with the upstream region of the E. coli tyrT promoter

13 October 2022

66

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transcription-driven supercoiling of DNA: direct biochemical evidence from in vitro studies

13 October 2022

67

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Phosphorylation of nitrogen regulator I (NRI) of Escherichia coli

13 October 2022

68

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

In vitro transcription of the nitrogen fixation regulatory operon nifLA of Klebsiella pneumoniae

13 October 2022

69

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

Transcription generates positively and negatively supercoiled domains in the template.

13 October 2022

71

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90388-Z

13 October 2022

Identifiers

1 reference

release_s7m5voe2d5fuvl5wdozqxc5u34

3 November 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/s7m5voe2d5fuvl5wdozqxc5u34

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference