Assessing methanotrophy and carbon fixation for biofuel production by Methanosarcina acetivorans (Q42685603)

4 November 2017

Assessing methanotrophy and carbon fixation for biofuel production by Methanosarcina acetivorans (English)

1 reference

Methanosarcina acetivorans

4 November 2017

0 references

0 references

object named as

Methanosarcina acetivorans

1 reference

1 reference

Saratram Gopalakrishnan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

author name string

Hadi Nazem-Bokaee

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

James G Ferry

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Thomas K Wood

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Costas D Maranas

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

publication date

17 January 2016

1 reference

4 November 2017

Microbial Cell Factories

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

page(s)

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

Reversing methanogenesis to capture methane for liquid biofuel precursors.

11 June 2020

cites work

1 reference

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Methane oxidation by anaerobic archaea for conversion to liquid fuels.

27 May 2018

1 reference

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An exact arithmetic toolbox for a consistent and reproducible structural analysis of metabolic network models

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Characterization of the RnfB and RnfG subunits of the Rnf complex from the archaeon Methanosarcina acetivorans

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Bioenergetics and anaerobic respiratory chains of aceticlastic methanogens

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

MrpA functions in energy conversion during acetate-dependent growth of Methanosarcina acetivorans

27 May 2018

1 reference

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The global methane cycle: recent advances in understanding the microbial processes involved

27 May 2018

1 reference

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Methane, microbes and models: fundamental understanding of the soil methane cycle for future predictions.

27 May 2018

1 reference

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Evolution of Na(+) and H(+) bioenergetics in methanogenic archaea

27 May 2018

1 reference

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BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Genetic manipulation of Methanosarcina spp.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Energy conservation via electron bifurcating ferredoxin reduction and proton/Na(+) translocating ferredoxin oxidation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Role of the fused corrinoid/methyl transfer protein CmtA during CO-dependent growth of Methanosarcina acetivorans

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Promiscuous archaeal ATP synthase concurrently coupled to Na+ and H+ translocation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Genome-scale metabolic reconstruction and hypothesis testing in the methanogenic archaeon Methanosarcina acetivorans C2A.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Structure of a methyl-coenzyme M reductase from Black Sea mats that oxidize methane anaerobically

27 May 2018

1 reference

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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Anaerobic oxidation of methane with sulfate: on the reversibility of the reactions that are catalyzed by enzymes also involved in methanogenesis from CO2.

27 May 2018

1 reference

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The rush to drill for natural gas: a public health cautionary tale

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Metabolic reconstruction of the archaeon methanogen Methanosarcina Acetivorans.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Coupling of ferredoxin and heterodisulfide reduction via electron bifurcation in hydrogenotrophic methanogenic archaea

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

What is flux balance analysis?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Acetolactate synthase from Bacillus subtilis serves as a 2-ketoisovalerate decarboxylase for isobutanol biosynthesis in Escherichia coli

27 May 2018

1 reference

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Anaerobic oxidation of methane: progress with an unknown process

27 May 2018

1 reference

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Improved approach for transferring and cultivating Methanosarcina acetivorans C2A (DSM 2834).

27 May 2018

1 reference

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Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels

27 May 2018

1 reference

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Methanogenic archaea: ecologically relevant differences in energy conservation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Genetic analysis of the methanol- and methylamine-specific methyltransferase 2 genes of Methanosarcina acetivorans C2A

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methyl sulfide production by a novel carbon monoxide metabolism in Methanosarcina acetivorans

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Class I and class II lysyl-tRNA synthetase mutants and the genetic encoding of pyrrolysine in Methanosarcina spp.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

The biochemistry of methane oxidation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Quantitative proteomic and microarray analysis of the archaeon Methanosarcina acetivorans grown with acetate versus methanol

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

An unconventional pathway for reduction of CO2 to methane in CO-grown Methanosarcina acetivorans revealed by proteomics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Electron transport in the pathway of acetate conversion to methane in the marine archaeon Methanosarcina acetivorans

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Production and Consumption of H(2) during Growth of Methanosarcina spp. on Acetate

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methanosarcina acetivorans sp. nov., an Acetotrophic Methane-Producing Bacterium Isolated from Marine Sediments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methanol-dependent gene expression demonstrates that methyl-coenzyme M reductase is essential in Methanosarcina acetivorans C2A and allows isolation of mutants with defects in regulation of the methanol utilization pathway.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Trace methane oxidation studied in several Euryarchaeota under diverse conditions.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Proteome of Methanosarcina acetivorans Part II: comparison of protein levels in acetate- and methanol-grown cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Proteome of Methanosarcina acetivorans Part I: an expanded view of the biology of the cell

27 May 2018

1 reference

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Biological methane oxidation: regulation, biochemistry, and active site structure of particulate methane monooxygenase

27 May 2018

1 reference

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Anaerobic growth of Methanosarcina acetivorans C2A on carbon monoxide: an unusual way of life for a methanogenic archaeon

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

The genome of M. acetivorans reveals extensive metabolic and physiological diversity

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

New perspectives on anaerobic methane oxidation.

27 May 2018

1 reference

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Methane-consuming archaebacteria in marine sediments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

KEGG: Kyoto Encyclopedia of Genes and Genomes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Soil microorganisms as controllers of atmospheric trace gases (H2, CO, CH4, OCS, N2O, and NO)

27 May 2018

1 reference

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Ferredoxin requirement for electron transport from the carbon monoxide dehydrogenase complex to a membrane-bound hydrogenase in acetate-grown Methanosarcina thermophila

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methane formation and methane oxidation by methanogenic bacteria

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methanogenesis by Methanosarcina acetivorans involves two structurally and functionally distinct classes of heterodisulfide reductase

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Manganese- and iron-dependent marine methane oxidation

16 August 2018

1 reference

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In vivo role of three fused corrinoid/methyl transfer proteins in Methanosarcina acetivorans.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Assimilation of methane and inorganic carbon by microbial communities mediating the anaerobic oxidation of methane

16 August 2018

1 reference

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Methane as fuel for anaerobic microorganisms

16 August 2018

1 reference

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Metabolic engineering of Escherichia coli for 1-butanol production.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Methyl sulfides as intermediates in the anaerobic oxidation of methane

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Genetic analysis of mch mutants in two Methanosarcina species demonstrates multiple roles for the methanopterin-dependent C-1 oxidation/reduction pathway and differences in H(2) metabolism between closely related species

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4716644

Rethinking biological activation of methane and conversion to liquid fuels

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26776497

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Electron transport during aceticlastic methanogenesis byMethanosarcina acetivoransinvolves a sodium-translocating Rnf complex

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26776497

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Calculation of standard transformed Gibbs energies and standard transformed enthalpies of biochemical reactants

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26776497

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12934-015-0404-4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

11 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

PubMed publication ID

26776497

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26776497%20AND%20SRC:MED&resulttype=core&format=json