The ribosome modulates nascent protein folding (Q42714513)

5 November 2017

The ribosome modulates nascent protein folding (English)

1 reference

5 November 2017

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3

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5 November 2017

5

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5 November 2017

Christian M Kaiser

1

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5 November 2017

Daniel H Goldman

series ordinal

2

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5 November 2017

Ignacio Tinoco

series ordinal

4

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5 November 2017

language of work or name

English

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publication date

1 December 2011

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5 November 2017

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5 November 2017

334

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5 November 2017

6063

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5 November 2017

1723-1727

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The ribosome uses two active mechanisms to unwind messenger RNA during translation

5 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

The various facets of the protein-folding activity of the ribosome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Ligand-driven vectorial folding of ribosome-bound human CFTR NBD1

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Transient tertiary structure formation within the ribosome exit port

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

The folding cooperativity of a protein is controlled by its chain topology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

A role for codon order in translation dynamics.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

alpha-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Lessons from the lysozyme of phage T4

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Slowing bacterial translation speed enhances eukaryotic protein folding efficiency

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Electrostatic effects on funneled landscapes and structural diversity in denatured protein ensembles

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

The native 3D organization of bacterial polysomes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Thermodynamics and kinetics of protein folding under confinement

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Theory, analysis, and interpretation of single-molecule force spectroscopy experiments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Chain dynamics of nascent polypeptides emerging from the ribosome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Cotranslational folding promotes beta-helix formation and avoids aggregation in vivo

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Multiple routes and structural heterogeneity in protein folding

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Recent advances in optical tweezers

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Structure and dynamics of a ribosome-bound nascent chain by NMR spectroscopy

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

The relationships between the isoelectric point and: length of proteins, taxonomy and ecology of organisms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Exploring subdomain cooperativity in T4 lysozyme II: uncovering the C-terminal subdomain as a hidden intermediate in the kinetic folding pathway

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Intermediates: ubiquitous species on folding energy landscapes?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

A "silent" polymorphism in the MDR1 gene changes substrate specificity

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Molecular simulations of cotranslational protein folding: fragment stabilities, folding cooperativity, and trapping in the ribosome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Sub-microsecond protein folding

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Protein structure by mechanical triangulation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Mechanical processes in biochemistry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Chain length dependence of apomyoglobin folding: structural evolution from misfolded sheets to native helices.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Molecular chaperones in the cytosol: from nascent chain to folded protein

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Optimized synthesis of RNA-protein fusions for in vitro protein selection

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

mRNA composition and control of bacterial gene expression

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Contact order, transition state placement and the refolding rates of single domain proteins.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Subdomain interactions as a determinant in the folding and stability of T4 lysozyme

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Ribosomes and translation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Entropic elasticity of lambda-phage DNA

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Translation is a non-uniform process. Effect of tRNA availability on the rate of elongation of nascent polypeptide chains

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Principles that govern the folding of protein chains

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Control of enzyme activity by an engineered disulfide bond

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Transient ribosomal attenuation coordinates protein synthesis and co-translational folding.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Folding zones inside the ribosomal exit tunnel

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172366

Observation of a single-beam gradient force optical trap for dielectric particles

16 August 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Genetically encoded short peptide tag for versatile protein labeling by Sfp phosphopantetheinyl transferase

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

A minimal peptide substrate in biotin holoenzyme synthetase-catalyzed biotinylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Decreased resistance to bacterial infection and granulocyte defects in IAP-deficient mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Cell-free translation reconstituted with purified components

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

A general method for manipulating DNA sequences from any organism with optical tweezers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Optical-trap force transducer that operates by direct measurement of light momentum

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Direct observation of the three-state folding of a single protein molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Analysis of single-molecule FRET trajectories using hidden Markov modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Probability distributions of molecular observables computed from Markov models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

The folding pathway of T4 lysozyme: the high-resolution structure and folding of a hidden intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

The Geometry of the Ribosomal Polypeptide Exit Tunnel

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Conformational Pathway of the Polypeptide Chain of Chymotrypsin Inhibitor-2 Growing from its N Terminusin vitro. Parallels with the Protein Folding Pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Stabilization of Proteins in Confined Spaces†

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1209740

Formation of Randomly Paired Disulfide Bonds in Des-(121–124)-ribonuclease after Reduction and Reoxidation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22194581

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Exploring the folding funnel of a polypeptide chain by biophysical studies on protein fragments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22194581

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1209740

1 reference

5 November 2017

0 references

1 reference

5 November 2017

1 reference