Genomic data integration for ecological and evolutionary traits in non-model organisms (Q42745731)

6 November 2017

Genomic data integration for ecological and evolutionary traits in non-model organisms (English)

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6 November 2017

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6 November 2017

Nicolas Nègre

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Denis Tagu

object named as

Denis Tagu

series ordinal

1

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language of work or name

English

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publication date

17 July 2014

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6 November 2017

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6 November 2017

15

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6 November 2017

490

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maintained by WikiProject

6 November 2017

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https://scigraph.springernature.com/pub.10.1186/1471-2164-15-490

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cites work

The i5K Initiative: Advancing Arthropod Genomics for Knowledge, Human Health, Agriculture, and the Environment

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The genomic and transcriptomic landscape of a HeLa cell line

27 May 2018

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Is junk DNA bunk? A critique of ENCODE

27 May 2018

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On the immortality of television sets: "function" in the human genome according to the evolution-free gospel of ENCODE

27 May 2018

1 reference

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RNA-binding proteins in Mendelian disease.

27 May 2018

1 reference

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Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome

27 May 2018

1 reference

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Simultaneous SNP identification and assessment of allele-specific bias from ChIP-seq data

27 May 2018

1 reference

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The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

27 May 2018

1 reference

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Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species

27 May 2018

1 reference

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HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature

27 May 2018

1 reference

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Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

27 May 2018

1 reference

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The monarch butterfly genome yields insights into long-distance migration

27 May 2018

1 reference

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Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification

27 May 2018

1 reference

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A cis-regulatory map of the Drosophila genome.

27 May 2018

1 reference

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The developmental transcriptome of Drosophila melanogaster

27 May 2018

1 reference

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Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

27 May 2018

1 reference

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Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Identification of functional elements and regulatory circuits by Drosophila modENCODE

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

A map of human genome variation from population-scale sequencing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

27 May 2018

1 reference

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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Nucleosome landscape and control of transcription in the human malaria parasite

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species

27 May 2018

1 reference

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The NIH Human Microbiome Project

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Loss of the insulator protein CTCF during nematode evolution

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

A second generation human haplotype map of over 3.1 million SNPs

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

RNA regulons: coordination of post-transcriptional events

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

What is a gene, post-ENCODE? History and updated definition

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Genetics. Getting closer to the whole picture.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Initial sequencing and analysis of the human genome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

The Sequence of the Human Genome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

The genome sequence of Drosophila melanogaster

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Comprehensive and definitive molecular cytogenetic characterization of HeLa cells by spectral karyotyping

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

The ENCODE project: missteps overshadowing a success

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

Linking genes to communities and ecosystems: Daphnia as an ecogenomic model.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4108784

16 August 2018

Identifiers

DOI

10.1186/1471-2164-15-490

1 reference

Dimensions Publication ID

6 November 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-490

1 reference

6 November 2017

1 reference