Novel peptide identification from tandem mass spectra using ESTs and sequence database compression (Q42801019)

7 November 2017

Novel peptide identification from tandem mass spectra using ESTs and sequence database compression (English)

1 reference

7 November 2017

0 references

Nathan J Edwards

1

1 reference

7 November 2017

17 April 2007

1 reference

Molecular Systems Biology

7 November 2017

1 reference

7 November 2017

3

1 reference

7 November 2017

102

1 reference

Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

7 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

27 May 2018

The PeptideAtlas project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Improving reproducibility and sensitivity in identifying human proteins by shotgun proteomics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

The International Protein Index: an integrated database for proteomics experiments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

TANDEM: matching proteins with tandem mass spectra

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

UniProt: the Universal Protein knowledgebase

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

The human genome browser at UCSC

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Probability-based protein identification by searching sequence databases using mass spectrometry data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

dbEST--database for "expressed sequence tags"

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

1-Tuple DNA sequencing: computer analysis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: I. Statistically annotated datasets for peptide sequences and proteins identified via the application of ICAT

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1865584

Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17437027

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Matching, Euler tours and the Chinese postman

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FMSB4100142

inferred from DOI database lookup

7 January 2021

based on heuristic

An Efficient Implementation of a Scaling Minimum-Cost Flow Algorithm

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FMSB4100142

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/MSB4100142

1 reference

7 November 2017

1 reference

7 November 2017

1 reference

PMCID

1865584