Determinants of protein side-chain packing (Q42843982)

8 November 2017

Determinants of protein side-chain packing (English)

1 reference

8 November 2017

Tanimura R

1

1 reference

PMCID

2142755

8 November 2017

Kidera A

series ordinal

2

1 reference

PMCID

2142755

8 November 2017

Nakamura H

series ordinal

3

1 reference

8 November 2017

1 December 1994

1 reference

8 November 2017

1 reference

8 November 2017

3

1 reference

8 November 2017

12

1 reference

8 November 2017

2358-2365

1 reference

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

8 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Modeling side-chain conformation for homologous proteins using an energy-based rotamer search

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

The fuzzy-end elimination theorem: correctly implementing the side chain placement algorithm based on the dead-end elimination theorem

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Application of a self-consistent mean field theory to predict protein side-chains conformation and estimate their conformational entropy

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Response of dynamic structure to removal of a disulfide bond: normal mode refinement of C77A/C95A mutant of human lysozyme

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Theoretical Studies of Protein Folding

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Environment and exposure to solvent of protein atoms. Lysozyme and insulin

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Spin glasses and the statistical mechanics of protein folding

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Rebuilding flavodoxin from C alpha coordinates: a test study

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Prediction of protein side-chain conformation by packing optimization.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

A new approach to the rapid determination of protein side chain conformations

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

The Protein Data Bank: a computer-based archival file for macromolecular structures

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Ligand docking to proteins with discrete side-chain flexibility.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2142755

Construction of side-chains in homology modelling. Application to the C-terminal lobe of rhizopuspepsin

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/7756990

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A method to configure protein side-chains from the main-chain trace in homology modelling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/7756990

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRO.5560031220

1 reference

8 November 2017

1 reference

8 November 2017

1 reference

PMCID

2142755