Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining (Q42844670)

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scientific article published on June 2005

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English	Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining	scientific article published on June 2005

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scholarly article

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12 January 2020

Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining (English)

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12 January 2020

retrotransposon

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2

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12 January 2020

Tammy A Morrish

7

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12 January 2020

author name string

Nora Zingler

1

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12 January 2020

Hans-Peter Brose

3

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12 January 2020

Volker Schoder

4

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12 January 2020

Thomas Jahns

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12 January 2020

Kay-Martin O Hanschmann

6

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12 January 2020

Johannes Löwer

8

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12 January 2020

Gerald G Schumann

9

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12 January 2020

publication date

1 June 2005

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12 January 2020

Genome Research

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12 January 2020

15

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12 January 2020

6

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12 January 2020

780-789

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12 January 2020

Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The human L1 promoter: variable transcription initiation sites and a major impact of upstream flanking sequence on promoter activity

1 reference

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27 May 2018

DNA double strand break repair in human bladder cancer is error prone and involves microhomology-associated end-joining

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

A YY1-binding site is required for accurate human LINE-1 transcription initiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Integration of the 5' end of the retrotransposon, R2Bm, can be complemented by homologous recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Microhomology-dependent end joining and repair of transposon-induced DNA hairpins by host factors in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Restraining the V(D)J recombinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

LINE-mediated retrotransposition of marked Alu sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

High-affinity, non-sequence-specific RNA binding by the open reading frame 1 (ORF1) protein from long interspersed nuclear element 1 (LINE-1).

1 reference

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27 May 2018

Human L1 element target-primed reverse transcription in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Molecular archeology of L1 insertions in the human genome.

1 reference

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27 May 2018

A comprehensive analysis of recently integrated human Ta L1 elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Alu repeats and human genomic diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The reverse transcriptase of the R2 non-LTR retrotransposon: continuous synthesis of cDNA on non-continuous RNA templates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Repair of sequence-specific 125I-induced double-strand breaks by nonhomologous DNA end joining in mammalian cell-free extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Biology of mammalian L1 retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Role of the non-homologous DNA end joining pathway in the early steps of retroviral infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Initial sequencing and analysis of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Nucleic acid chaperone activity of the ORF1 protein from the mouse LINE-1 retrotransposon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Mechanisms of DNA double-strand break repair and their potential to induce chromosomal aberrations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Human LINE retrotransposons generate processed pseudogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The age and evolution of non-LTR retrotransposable elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Double-strand break repair in Ku86- and XRCC4-deficient cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Retrotransposon R1Bm endonuclease cleaves the target sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

In vitro properties of the first ORF protein from mouse LINE-1 support its role in ribonucleoprotein particle formation during retrotransposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Many human L1 elements are capable of retrotransposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Retrotransposon reverse-transcriptase-mediated repair of chromosomal breaks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Two additional potential retrotransposons isolated from a human L1 subfamily that contains an active retrotransposable element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

An in vivo assay for the reverse transcriptase of human retrotransposon L1 in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Alu transcripts: cytoplasmic localisation and regulation by DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Transcriptional analysis of interspersed repetitive polymerase III transcription units in human DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Analysis of transcription of the human Alu family ubiquitous repeating element by eukaryotic RNA polymerase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Mechanisms of nonhomologous recombination in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

Sequence analysis of a KpnI family member near the 3' end of human beta-globin gene

1 reference

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27 May 2018

Unit-length line-1 transcripts in human teratocarcinoma cells

1 reference

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27 May 2018

Reverse Transcriptase Encoded by a Human Transposable Element

1 reference

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27 May 2018

Isolation of an active human transposable element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

A mechanism for deletion formation in DNA by human cell extracts: the involvement of short sequence repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

27 May 2018

The structures of mouse and human L1 elements reflect their insertion mechanism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

16 August 2018

Healing the wounds inflicted by sleeping beauty transposition by double-strand break repair in mammalian somatic cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

16 August 2018

DNA repair mediated by endonuclease-independent LINE-1 retrotransposition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

16 August 2018

Targeting of human retrotransposon integration is directed by the specificity of the L1 endonuclease for regions of unusual DNA structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

16 August 2018

Rejoining of DNA double-strand breaks in vitro by single-strand annealing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

16 August 2018

Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences

1 reference

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16 August 2018

Capture of retrotransposon DNA at the sites of chromosomal double-strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142468

1 December 2018

Genomic deletions created upon LINE-1 retrotransposition

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

End-to-end template jumping by the reverse transcriptase encoded by the R2 retrotransposon

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High processivity of the reverse transcriptase from a non-long terminal repeat retrotransposon

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dispersal process associated with the L1 family of interspersed repetitive DNA sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human l1 retrotransposition is associated with genetic instability in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

L1 (LINE-1) retrotransposon evolution and amplification in recent human history

1 reference

https://pubmed.ncbi.nlm.nih.gov/15930490

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1101/GR.3421505

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12 January 2020

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24 November 2022

based on heuristic

mapped directly with Wikidata item

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Europe PubMed Central

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12 January 2020

1 reference

Europe PubMed Central

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12 January 2020

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