Competing interactions contributing to alpha-helical stability in aqueous solution (Q42844684)

8 November 2017

Competing interactions contributing to alpha-helical stability in aqueous solution (English)

1 reference

8 November 2017

Bodkin MJ

1

1 reference

PMCID

2143094

8 November 2017

Goodfellow JM

series ordinal

2

1 reference

8 November 2017

1 April 1995

1 reference

8 November 2017

1 reference

8 November 2017

4

1 reference

8 November 2017

603-612

1 reference

8 November 2017

4

1 reference

Structural basis of amino acid alpha helix propensity

8 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Stabilization of alpha-helical structures in short peptides via end capping

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Residue helix parameters obtained from dichroic analysis of peptides of defined sequence.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Helix capping propensities in peptides parallel those in proteins

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

A salt bridge stabilizes the helix formed by isolated C-peptide of RNase A

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Amino acid preferences for specific locations at the ends of alpha helices

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Design of peptides and proteins

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Weakly polar interactions in proteins.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Helix signals in proteins

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Alpha-helix stabilization by natural and unnatural amino acids with alkyl side chains

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Large differences in the helix propensities of alanine and glycine

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Straight-chain non-polar amino acids are good helix-formers in water.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Molecular dynamics simulations of the unfolding of an alpha-helical analogue of ribonuclease A S-peptide in water

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Side chain-backbone hydrogen bonding contributes to helix stability in peptides derived from an alpha-helical region of carboxypeptidase A.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

The helical s constant for alanine in water derived from template-nucleated helices

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Unfolding of an ?-helix in water

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Perturbation of peptide conformations induced in anisotropic environments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Cutoff size does strongly influence molecular dynamics results on solvated polypeptides.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Molecular dynamics simulations of helix denaturation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

The mechanism of alpha-helix formation by peptides

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Elucidating the folding problem of helical peptides using empirical parameters.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

A single carboxy-terminal arginine determines the amino-terminal helix conformation of an alanine-based peptide

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Relative helix-forming tendencies of nonpolar amino acids

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Studies of synthetic helical peptides using circular dichroism and nuclear magnetic resonance

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Effect of alanine versus glycine in alpha-helices on protein stability

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143094

Helical peptides with three pairs of Asp-Arg and Glu-Arg residues in different orientations and spacings

16 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FPRO.5560040402

Design of helix ends. Amino acid preferences, hydrogen bonding and electrostatic interactions

21 January 2018

1 reference

12 December 2020

Tests of the helix dipole model for stabilization of α-helices

1 reference

12 December 2020

Analysis of the relationship between side-chain conformation and secondary structure in globular proteins

1 reference

12 December 2020

Water-inserted alpha-helical segments implicate reverse turns as folding intermediates

1 reference

12 December 2020

Effect of central-residue replacements on the helical stability of a monomeric peptide

1 reference

12 December 2020

Position effect on apparent helical propensities in the C-peptide helix

1 reference

12 December 2020

The (i, i + 4) Phe-His interaction studied in an alanine-based alpha-helix

1 reference

12 December 2020

Hydrogen bond strength and beta-sheet propensities: the role of a side chain blocking effect

1 reference

12 December 2020

A measure of helical propensity for amino acids in membrane environments

1 reference

12 December 2020

Helix-coil transition of the isolated amino terminus of ribonuclease

1 reference

12 December 2020

The solubility of amino acids and two glycine peptides in aqueous ethanol and dioxane solutions. Establishment of a hydrophobicity scale

1 reference

12 December 2020

Identifiers

DOI

10.1002/PRO.5560040402

1 reference

8 November 2017

1 reference

8 November 2017

1 reference

PMCID

2143094