Diffusion constant of K+ inside Gramicidin A: a comparative study of four computational methods. (Q43074618)

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25 December 2019

title

Diffusion constant of K+ inside Gramicidin A: a comparative study of four computational methods (English)

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25 December 2019

2

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25 December 2019

author name string

Artem B Mamonov

series ordinal

1

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25 December 2019

Rob D Coalson

series ordinal

3

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publication date

6 April 2006

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25 December 2019

published in

Biophysical Chemistry

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25 December 2019

volume

124

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page(s)

268-278

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25 December 2019

issue

3

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Theoretical studies of the M2 transmembrane segment of the glycine receptor: models of the open pore structure and current-voltage characteristics

25 December 2019

cites work

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Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map

25 May 2018

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On the importance of atomic fluctuations, protein flexibility, and solvent in ion permeation

25 May 2018

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Ion permeation through the alpha-hemolysin channel: theoretical studies based on Brownian dynamics and Poisson-Nernst-Plank electrodiffusion theory

25 May 2018

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Energetics of ion conduction through the gramicidin channel

25 May 2018

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The role of the dielectric barrier in narrow biological channels: a novel composite approach to modeling single-channel currents

25 May 2018

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Continuum electrostatics fails to describe ion permeation in the gramicidin channel

25 May 2018

1 reference

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X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity

25 May 2018

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Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics

25 May 2018

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Mechanisms of permeation and selectivity in calcium channels

25 May 2018

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A combined molecular dynamics and diffusion model of single proton conduction through gramicidin

25 May 2018

1 reference

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Molecular dynamics estimates of ion diffusion in model hydrophobic and KcsA potassium channels.

25 May 2018

1 reference

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A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels

25 May 2018

1 reference

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Three-dimensional Poisson-Nernst-Planck theory studies: influence of membrane electrostatics on gramicidin A channel conductance

25 May 2018

1 reference

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Permeation of ions across the potassium channel: Brownian dynamics studies

25 May 2018

1 reference

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A lattice relaxation algorithm for three-dimensional Poisson-Nernst-Planck theory with application to ion transport through the gramicidin A channel.

25 May 2018

1 reference

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The Structure of the Potassium Channel: Molecular Basis of K+ Conduction and Selectivity

25 May 2018

1 reference

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Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore

25 May 2018

1 reference

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Refinement of the spatial structure of the gramicidin A ion channel

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2266632

Exploring the origin of the ion selectivity of the KcsA potassium channel

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2266632

A molecular dynamics study of gating in dioxolane-linked gramicidin A channels

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2266632

Effective diffusion coefficients of K+ and Cl- ions in ion channel models

15 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16797116

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular dynamics simulation of continuous current flow through a model biological membrane channel

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16797116

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BPC.2006.03.019

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25 December 2019

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25 December 2019

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