Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis. (Q43154603)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18977760%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

title

Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis (English)

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25 December 2019

5

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25 December 2019

author name string

Masayuki Su'etsugu

1

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25 December 2019

Kenta Nakamura

2

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25 December 2019

Kenji Keyamura

3

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25 December 2019

Yuka Kudo

4

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25 December 2019

language of work or name

English

0 references

publication date

30 October 2008

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Journal of Biological Chemistry

25 December 2019

published in

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25 December 2019

volume

283

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25 December 2019

issue

52

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25 December 2019

page(s)

36118-36131

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The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes

25 December 2019

cites work

1 reference

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Regulation of the initiation of chromosomal replication in bacteria

25 May 2018

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SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC.

25 May 2018

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DnaA: controlling the initiation of bacterial DNA replication and more

25 May 2018

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Two E3 ubiquitin ligases, SCF-Skp2 and DDB1-Cul4, target human Cdt1 for proteolysis.

25 May 2018

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Functional dissection of YabA, a negative regulator of DNA replication initiation in Bacillus subtilis

25 May 2018

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25 May 2018

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PCNA is a cofactor for Cdt1 degradation by CUL4/DDB1-mediated N-terminal ubiquitination

25 May 2018

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Overexpression of the Hda DnaA-related protein in Escherichia coli inhibits multiplication, affects membrane permeability, and induces the SOS response

25 May 2018

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ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA.

25 May 2018

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AAA+ proteins: have engine, will work

25 May 2018

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Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication

25 May 2018

1 reference

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DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication.

25 May 2018

1 reference

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Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex.

25 May 2018

1 reference

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Interaction of the sliding clamp beta-subunit and Hda, a DnaA-related protein.

25 May 2018

1 reference

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Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ ATPases.

25 May 2018

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Motors and switches: AAA+ machines within the replisome.

25 May 2018

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The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication

25 May 2018

1 reference

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An expanded view of bacterial DNA replication.

25 May 2018

1 reference

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A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo

25 May 2018

1 reference

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A universal protein-protein interaction motif in the eubacterial DNA replication and repair systems.

25 May 2018

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Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

25 May 2018

1 reference

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Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli

25 May 2018

1 reference

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AAA+ superfamily ATPases: common structure--diverse function

25 May 2018

1 reference

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Feedback controls restrain the initiation of Escherichia coli chromosomal replication.

25 May 2018

1 reference

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The initiation codon affects ribosome binding and translational efficiency in Escherichia coli of cI mRNA with or without the 5' untranslated leader

25 May 2018

1 reference

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Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli

25 May 2018

1 reference

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Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin

25 May 2018

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AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes

25 May 2018

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A new 34-kilodalton isoform of human fibroblast growth factor 2 is cap dependently synthesized by using a non-AUG start codon and behaves as a survival factor.

25 May 2018

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Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein

25 May 2018

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The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function

25 May 2018

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The complete genome sequence of Escherichia coli K-12

25 May 2018

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Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription

25 May 2018

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Escherichia coli translation initiation factor 3 discriminates the initiation codon in vivo

25 May 2018

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SeqA: a negative modulator of replication initiation in E. coli

25 May 2018

1 reference

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E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration

25 May 2018

1 reference

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Chromosome replication and the division cycle of Escherichia coli B/r.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

Information content of binding sites on nucleotide sequences

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

Translation initiation at an upstream CUG codon regulates the expression of Hibiscus chlorotic ringspot virus coat protein

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

An isolated Hda-clamp complex is functional in the regulatory inactivation of DnaA and DNA replication.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex

15 August 2018

1 reference

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Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

DNA replication-coupled inactivation of DnaA protein in vitro: a role for DnaA arginine-334 of the AAA+ Box VIII motif in ATP hydrolysis

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2662290

PCNA functions as a molecular platform to trigger Cdt1 destruction and prevent re-replication

15 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18977760

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M803158200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18977760%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18977760%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

PubMed publication ID

18977760

1 reference