The different interactions of lysine and arginine side chains with lipid membranes (Q43475281)

http://europepmc.org/abstract/PMC/6548679

1 July 2019

title

The different interactions of lysine and arginine side chains with lipid membranes (English)

1 reference

http://europepmc.org/abstract/PMC/6548679

1 July 2019

author

Toby W Allen

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Libo Li

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Libo Li

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

author name string

Igor Vorobyov

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

language of work or name

English

0 references

publication date

27 September 2013

1 reference

http://europepmc.org/abstract/PMC/6548679

1 July 2019

published in

Journal of Physical Chemistry B

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

volume

117

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

issue

40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

page(s)

11906-11920

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

The design, synthesis, and evaluation of molecules that enable or enhance cellular uptake: peptoid molecular transporters

12 June 2020

cites work

1 reference

12 December 2020

Polyarginine enters cells more efficiently than other polycationic homopolymers

1 reference

12 December 2020

Optimality of the genetic code with respect to protein stability and amino-acid frequencies

1 reference

12 December 2020

Antimicrobial peptides of multicellular organisms

1 reference

12 December 2020

The hydration structure of guanidinium and thiocyanate ions: implications for protein stability in aqueous solution

1 reference

12 December 2020

The principle of gating charge movement in a voltage-dependent K+ channel

1 reference

12 December 2020

The effect of interactions involving ionizable residues flanking membrane-inserted hydrophobic helices upon helix-helix interaction.

1 reference

12 December 2020

Amino acid preferences of small proteins. Implications for protein stability and evolution

1 reference

12 December 2020

Anion-mediated transfer of polyarginine across liquid and bilayer membranes

1 reference

12 December 2020

Membrane binding and translocation of cell-penetrating peptides

1 reference

12 December 2020

The structure of aqueous guanidinium chloride solutions.

1 reference

12 December 2020

Direct observation of anion-mediated translocation of fluorescent oligoarginine carriers into and across bulk liquid and anionic bilayer membranes

1 reference

12 December 2020

A quantitative assessment of models for voltage-dependent gating of ion channels

1 reference

12 December 2020

Membrane insertion of a potassium-channel voltage sensor

1 reference

12 December 2020

Noncovalent binding between guanidinium and anionic groups: focus on biological- and synthetic-based arginine/guanidinium interactions with phosph[on]ate and sulf[on]ate residues

1 reference

12 December 2020

Membrane-permeable arginine-rich peptides and the translocation mechanisms

1 reference

12 December 2020

Transmembrane helices before, during, and after insertion

1 reference

12 December 2020

Role of lysine residues in membrane anchoring of saposin C.

1 reference

12 December 2020

Cationic host defense (antimicrobial) peptides

1 reference

12 December 2020

How does voltage open an ion channel?

1 reference

12 December 2020

Advances in antimicrobial peptide immunobiology

1 reference

12 December 2020

Paneth cell alpha-defensin synthesis and function.

1 reference

12 December 2020

Lipids out of equilibrium: energetics of desorption and pore mediated flip-flop

1 reference

12 December 2020

Arginine-mediated RNA recognition: the arginine fork.

1 reference

12 December 2020

Phospholipids and the origin of cationic gating charges in voltage sensors

1 reference

12 December 2020

Strengths of hydrogen bonds involving phosphorylated amino acid side chains

1 reference

12 December 2020

On the thermodynamic stability of a charged arginine side chain in a transmembrane helix

1 reference

12 December 2020

Partitioning of amino acid side chains into lipid bilayers: results from computer simulations and comparison to experiment

1 reference

12 December 2020

Toward understanding the cationicity of defensins. Arg and Lys versus their noncoded analogs

1 reference

12 December 2020

Counterion-mediated membrane penetration: cationic cell-penetrating peptides overcome Born energy barrier by ion-pairing with phospholipids.

1 reference

12 December 2020

Lonely arginine seeks friendly environment

1 reference

12 December 2020

Modeling charged protein side chains in lipid membranes.

1 reference

12 December 2020

A proposed signaling motif for nuclear import in mRNA processing via the formation of arginine claw

1 reference

12 December 2020

Position-resolved free energy of solvation for amino acids in lipid membranes from molecular dynamics simulations.

1 reference

12 December 2020

Is arginine charged in a membrane?

1 reference

12 December 2020

Methodological and cellular aspects that govern the internalization mechanisms of arginine-rich cell-penetrating peptides

1 reference

12 December 2020

Molecular code for transmembrane-helix recognition by the Sec61 translocon

1 reference

12 December 2020

Molecular dynamics simulations suggest a mechanism for translocation of the HIV-1 TAT peptide across lipid membranes

1 reference

12 December 2020

Does arginine remain protonated in the lipid membrane? Insights from microscopic pKa calculations

1 reference

12 December 2020

Distribution of amino acids in a lipid bilayer from computer simulations.

1 reference

12 December 2020

A buried lysine that titrates with a normal pKa: Role of conformational flexibility at the protein-water interface as a determinant of pKavalues

1 reference

12 December 2020

Stimulated endocytosis in penetratin uptake: effect of arginine and lysine

1 reference

12 December 2020

Assessing atomistic and coarse-grained force fields for protein-lipid interactions: the formidable challenge of an ionizable side chain in a membrane.

1 reference

12 December 2020

Potential of mean force and pKa profile calculation for a lipid membrane-exposed arginine side chain

1 reference

12 December 2020

Titratable Amino Acid Solvation in Lipid Membranes as a Function of Protonation State

1 reference

12 December 2020

The molecular origin of like-charge arginine-arginine pairing in water

1 reference

12 December 2020

Roles of arginine and lysine residues in the translocation of a cell-penetrating peptide from (13)C, (31)P, and (19)F solid-state NMR.

1 reference

12 December 2020

CHARMM: the biomolecular simulation program

1 reference

12 December 2020

Cell penetrating peptides: how do they do it?

1 reference

12 December 2020

Electropositive charge in alpha-defensin bactericidal activity: functional effects of Lys-for-Arg substitutions vary with the peptide primary structure

1 reference

12 December 2020

Protein contents in biological membranes can explain abnormal solvation of charged and polar residues

1 reference

12 December 2020

Anti-cancer therapies that utilize cell penetrating peptides.

1 reference

12 December 2020

Peptide-based matrices as drug delivery vehicles

1 reference

12 December 2020

Monte Carlo simulation studies of lipid order parameter profiles near integral membrane proteins

1 reference

12 December 2020

A Gating Charge Transfer Center in Voltage Sensors

1 reference

12 December 2020

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types

1 reference

12 December 2020

Electrostatics of deformable lipid membranes

1 reference

12 December 2020

Chemical versus mechanical perturbations on the protonation state of arginine in complex lipid membranes: insights from microscopic pKa calculations

1 reference

12 December 2020

On the role of anionic lipids in charged protein interactions with membranes

1 reference

12 December 2020

Impedimetric biosensor for early detection of cervical cancer

1 reference

12 December 2020

The role of membrane thickness in charged protein-lipid interactions.

1 reference

12 December 2020

Comparative study on the interaction of cell-penetrating polycationic polymers with lipid membranes

1 reference

12 December 2020

The role of tryptophan side chains in membrane protein anchoring and hydrophobic mismatch.

1 reference

12 December 2020

Buried lysine, but not arginine, titrates and alters transmembrane helix tilt.

1 reference

12 December 2020

Ion-induced defect permeation of lipid membranes

1 reference

12 December 2020

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

12 December 2020

The Role of Atomic Polarization in the Thermodynamics of Chloroform Partitioning to Lipid Bilayers.

1 reference

12 December 2020

Energy of an Ion crossing a Low Dielectric Membrane: Solutions to Four Relevant Electrostatic Problems

1 reference

12 December 2020

Affinities of amino acid side chains for solvent water

1 reference

12 December 2020

Differences in the interaction of heparin with arginine and lysine and the importance of these basic amino acids in the binding of heparin to acidic fibroblast growth factor

1 reference

12 December 2020

Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides.

1 reference

12 December 2020

Area/lipid of bilayers from NMR.

1 reference

12 December 2020

Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp

1 reference

12 December 2020

Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.

1 reference

12 December 2020

Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer

1 reference

12 December 2020

Experimentally determined hydrophobicity scale for proteins at membrane interfaces

1 reference

12 December 2020

A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems

1 reference

12 December 2020

Constant-pressure molecular dynamics investigation of cholesterol effects in a dipalmitoylphosphatidylcholine bilayer

1 reference

12 December 2020

Identifiers

DOI

10.1021/JP405418Y

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PubMed publication ID

24007457

1 reference