Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion (Q44482159)

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English	Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion	scientific article

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scholarly article

1 reference

Europe PubMed Central

3 December 2017

Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion (English)

1 reference

Europe PubMed Central

3 December 2017

author name string

Shannon F Holmes

1

1 reference

Europe PubMed Central

3 December 2017

Dorothy A Erie

2

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Europe PubMed Central

3 December 2017

language of work or name

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publication date

16 June 2003

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Europe PubMed Central

3 December 2017

number of pages

12

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Journal of Biological Chemistry

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Europe PubMed Central

3 December 2017

278

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Europe PubMed Central

3 December 2017

37

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Europe PubMed Central

3 December 2017

35597-35608

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Europe PubMed Central

3 December 2017

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

1 reference

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The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective

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Single-molecule study of transcriptional pausing and arrest by E. coli RNA polymerase

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Analysis of RNA chain elongation and termination by Saccharomyces cerevisiae RNA polymerase III.

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Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules

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A branched pathway in the early stage of transcription by Escherichia coli RNA polymerase.

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The many conformational states of RNA polymerase elongation complexes and their roles in the regulation of transcription

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RNA polymerase slides home: pause and termination site recognition

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Multiple interactions stabilize a single paused transcription intermediate in which hairpin to 3' end spacing distinguishes pause and termination pathways.

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Effects of neutral salts on RNA chain elongation and pausing by Escherichia coli RNA polymerase

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Isolation and structural analysis of the Escherichia coli trp leader paused transcription complex.

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Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex.

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Mapping and characterization of transcriptional pause sites in the early genetic region of bacteriophage T7.

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RNA polymerase II promoter-proximal pausing upregulates c-fos gene expression

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Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators

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Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators

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Escherichia coli RNA polymerase terminates transcription efficiently at rho-independent terminators on single-stranded DNA templates

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Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

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Program DYNAFIT for the analysis of enzyme kinetic data: application to HIV proteinase

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Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

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Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase

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Isolation and properties of transcribing ternary complexes of Escherichia coli RNA polymerase positioned at a single template base.

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Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

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Roles of RNA:DNA hybrid stability, RNA structure, and active site conformation in pausing by human RNA polymerase II.

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RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA.

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Shifting RNA polymerase into overdrive

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Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA.

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Transcription termination at intrinsic terminators: the role of the RNA hairpin

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The mechanism of intrinsic transcription termination.

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Regulatory sequences involved in the promotion and termination of RNA transcription

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Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

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A structural model of transcription elongation

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Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

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Identifiers

10.1074/JBC.M304496200

1 reference

Europe PubMed Central

3 December 2017

1 reference

Europe PubMed Central

3 December 2017

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