A conformational switch controls hepatitis delta virus ribozyme catalysis (Q44894635)

7 December 2017

A conformational switch controls hepatitis delta virus ribozyme catalysis (English)

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7 December 2017

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hepatitis delta virus

object named as

hepatitis delta virus

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5

Jennifer A Doudna

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7 December 2017

2

Kaihong Zhou

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7 December 2017

4

Jamie H D Cate

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7 December 2017

1

Ailong Ke

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7 December 2017

Fang Ding

3

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PubMed ID

15141216

7 December 2017

language of work or name

English

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publication date

1 May 2004

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7 December 2017

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7 December 2017

429

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7 December 2017

6988

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7 December 2017

201-205

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https://scigraph.springernature.com/pub.10.1038/nature02522

7 December 2017

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cites work

Catalytic strategies of the hepatitis delta virus ribozymes

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https://api.crossref.org/works/10.1038%2FNATURE02522

A host-specific function is required for ligation of a wide variety of ribozyme-processed RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Mechanistic characterization of the HDV genomic ribozyme: assessing the catalytic and structural contributions of divalent metal ions within a multichannel reaction mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Crystal structure of a hepatitis delta virus ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Crystallization and structure determination of a hepatitis delta virus ribozyme: use of the RNA-binding protein U1A as a crystallization module

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

pK(a) perturbation in genomic Hepatitis Delta Virus ribozyme catalysis evidenced by nucleotide analogue interference mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Imidazole rescue of a cytosine mutation in a self-cleaving ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

General acid-base catalysis in the mechanism of a hepatitis delta virus ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Energetic contribution of non-essential 5' sequence to catalysis in a hepatitis delta virus ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Reaction pathway of the trans-acting hepatitis delta virus ribozyme: a conformational change accompanies catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Local conformational changes in the catalytic core of the trans-acting hepatitis delta virus ribozyme accompany catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Trans-acting hepatitis delta virus ribozyme: catalytic core and global structure are dependent on the 5' substrate sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Metal ions in the structure and function of RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Site specific incorporation of 6-azauridine into the genomic HDV ribozyme active site

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Transition state stabilization by a catalytic RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

A pH-dependent conformational change, rather than the chemical step, appears to be rate-limiting in the hammerhead ribozyme cleavage reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Direct pK(a) measurement of the active-site cytosine in a genomic hepatitis delta virus ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Bi-cycling the furin pathway: from TGN localization to pathogen activation and embryogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Automated MAD and MIR structure solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

Self-cleavage of hepatitis delta virus genomic strand RNA is enhanced under partially denaturing conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Self-cleavage activity of the genomic HDV ribozyme in the presence of various divalent metal ions

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Involvement of a cytosine side chain in proton transfer in the rate-determining step of ribozyme self-cleavage

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Joining of RNAs by splinted ligation

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

The CCP4 suite: programs for protein crystallography

1 reference

https://api.crossref.org/works/10.1038%2FNATURE02522

7 January 2021

Identifiers

DOI

10.1038/NATURE02522

1 reference

PubMed ID

15141216

Dimensions Publication ID

7 December 2017

0 references

1 reference

PubMed ID

15141216