Upstream and downstream sequence elements determine the specificity of the rice tungro bacilliform virus promoter and influence RNA production after transcription initiation (Q45748305)

From Wikidata

Jump to navigation Jump to search

scientific article published in May 1999

Language	Label	Description	Also known as
English	Upstream and downstream sequence elements determine the specificity of the rice tungro bacilliform virus promoter and influence RNA production after transcription initiation	scientific article published in May 1999

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

Upstream and downstream sequence elements determine the specificity of the rice tungro bacilliform virus promoter and influence RNA production after transcription initiation (English)

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

author name string

A Klöti

1

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

C Henrich

2

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

S Bieri

3

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

X He

4

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

G Chen

5

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

P K Burkhardt

6

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

J Wünn

7

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

P Lucca

8

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

T Hohn

9

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

I Potrykus

10

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

J Fütterer

11

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

publication date

1 May 1999

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

number of pages

18

1 reference

based on heuristic

inferred from page(s)

Plant Molecular Biology

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

40

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

2

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

249-266

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

Specificity of a promoter from the rice tungro bacilliform virus for expression in phloem tissues

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequences downstream of translation start regulate quantitative expression of two petunia rbcS genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter elements required for developmental expression of the maize Adh1 gene in transgenic rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamics of potentiation and activation: GAGA factor and its role in heat shock gene regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transfer of Tat and release of TAR RNA during the activation of the human immunodeficiency virus type-1 transcription elongation complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characteristics of a strong promoter from figwort mosaic virus: comparison with the analogous 35S promoter from cauliflower mosaic virus and the regulated mannopine synthase promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the genome of rice tungro bacilliform virus: comparison with Commelina yellow mottle virus and caulimoviruses

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The regulatory regions of the rice tungro bacilliform virus promoter and interacting nuclear factors in rice (Oryza sativa L.)

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Roles of the 35S promoter and multiple overlapping domains in the pathogenicity of the pararetrovirus cauliflower mosaic virus

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Methylation of coding region alone inhibits gene expression in plant protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter and leader regions involved in the expression of the Arabidopsis ferredoxin A gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resistance to hygromycin B : A new marker for plant transformation studies.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of RNA initiation and elongation at the HIV-1 promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chimeric gene expression using maize intron in cultured cells of breadwheat

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modular organization and development activity of an Arabidopsis thaliana EF-1 alpha gene promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter-proximal poly(A) sites are processed efficiently, but the RNA products are unstable in the nucleus

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systemic induction of a potato pin2 promoter by wounding, methyl jasmonate, and abscisic acid in transgenic rice plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The human immunodeficiency virus type 1 long terminal repeat specifies two different transcription complexes, only one of which is regulated by Tat

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biology and epidemiology of rice viruses

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping the 5'-terminus of rice tungro bacilliform viral genomic RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhancement of foreign gene expression by a dicot intron in rice but not in tobacco is correlated with an increased level of mRNA and an efficient splicing of the intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a decay in transcription potential that results in elongation factor dependence of RNA polymerase II.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron-mediated enhancement of heterologous gene expression in maize

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-level tuber expression and sucrose inducibility of a potato Sus4 sucrose synthase gene require 5' and 3' flanking sequences and the leader intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Light-regulated expression of the Arabidopsis thaliana ferredoxin gene requires sequences upstream and downstream of the transcription initiation site

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of cis elements involved in Commelina yellow mottle virus promoter activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Introns act post-transcriptionally to increase expression of the Arabidopsis thaliana tryptophan pathway gene PAT1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of an efficient actin promoter for use in rice transformation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

gsa1 is a universal tetrapyrrole synthesis gene in soybean and is regulated by a GAGA element.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A phenylalanine ammonia-lyase gene from parsley: structure, regulation and identification of elicitor and light responsive cis-acting elements.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Delivery of foreign genes to intact barley cells by high-velocity microprojectiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A strong inhibitor of gene expression in the 5' untranslated region of the pollen-specific LAT59 gene to tomato

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant mRNA 3'-end formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Introns increase gene expression in cultured maize cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron splicing and intron-mediated enhanced expression in monocots

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient transcription from the rice tungro bacilliform virus promoter requires elements downstream of the transcription start site

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular biology of rice tungro viruses.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proximity to the promoter inhibits recognition of cauliflower mosaic virus polyadenylation signal.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Taking a new TAK on tat transactivation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exonic sequences are required for elicitor and light activation of a plant defense gene, but promoter sequences are sufficient for tissue specific expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter proximal sequences modulate RNA polymerase II elongation by a novel mechanism.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of tissue-specific elements in the CaMV 35S promoter.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rice tungro bacilliform virus open reading frames II and III are translated from polycistronic pregenomic RNA by leaky scanning.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The combination of a novel stimulatory element in the first exon of the maize Shrunken-1 gene with the following intron 1 enhances reporter gene expression up to 1000-fold

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular dissection of the AGAMOUS control region shows that cis elements for spatial regulation are located intragenically

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis thaliana small subunit leader and transit peptide enhance the expression of Bacillus thuringiensis proteins in transgenic plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The intron of Arabidopsis thaliana polyubiquitin genes is conserved in location and is a quantitative determinant of chimeric gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter elements required for phloem-specific gene expression from the RTBV promoter in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The first intron of the Arabidopsis thaliana gene coding for elongation factor 1 beta contains an enhancer-like element

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RF2a, a bZIP transcriptional activator of the phloem-specific rice tungro bacilliform virus promoter, functions in vascular development

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pararetroviruses and retroviruses: a comparative review of viral structure and gene expression strategies.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transgenic Indica rice breeding line IR58 expressing a synthetic cryIA(b) gene from Bacillus thuringiensis provides effective insect pest control

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rice tungro bacilliform virus: transcription and translation in protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increased gene expression by the first intron of maize shrunken-1 locus in grass species

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron position affects expression from the tpi promoter in rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of the rice Osgrp1 promoter-Gus reporter gene is specifically associated with cell elongation/expansion and differentiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Position-dependent ATT initiation during plant pararetrovirus rice tungro bacilliform virus translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron enhancement of gene expression and the splicing efficiency of introns in maize cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transgenic rice (Oryza sativa) endosperm expressing daffodil (Narcissus pseudonarcissus) phytoene synthase accumulates phytoene, a key intermediate of provitamin A biosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The sugarcane bacilliform badnavirus promoter is active in both monocots and dicots

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Splicing in a plant pararetrovirus

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and expression in transgenic tobacco and rice plants, of the cassava vein mosaic virus (CVMV) promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential interaction of the his pause RNA hairpin with RNA polymerase beta subunit residues 904-950 correlates with strong transcriptional pausing

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and promoter activity of a stress and developmentally regulated polyubiquitin-encoding gene of Nicotiana tabacum.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histochemical analysis of CaMV 35S promoter-beta-glucuronidase gene expression in transgenic rice plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron-dependent transient expression of the maize GapA1 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis GLABROUS1 Gene Requires Downstream Sequences for Function

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activity of a maize ubiquitin promoter in transgenic rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Post-transcriptional gene silencing in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An analysis of the sequence of an infectious clone of rice tungro bacilliform virus, a plant pararetrovirus

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of promoter, intron and enhancer elements on transient gene expression in sugar-cane and carrot protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/10412904

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1023/A:1006119517262

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2017

http://europepmc.org/abstract/MED/10412904

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q45748305&oldid=2207302771"