m(6)A-LAIC-seq reveals the census and complexity of the m(6)A epitranscriptome (Q46049894)

http://europepmc.org/abstract/PMC/5704921

19 December 2017

title

m(6)A-LAIC-seq reveals the census and complexity of the m(6)A epitranscriptome (English)

1 reference

http://europepmc.org/abstract/PMC/5704921

19 December 2017

author

Benoit Molinie

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Jin-kai Wang

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Zhi-xiang Lu

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Kaveh Daneshvar

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Kok Seong Lim

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Roman Hillebrand

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Nicholas Van Wittenberghe

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Benjamin D Howard

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Alan C Mullen

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Peter Dedon

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Yi Xing

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Cosmas C Giallourakis

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

publication date

4 July 2016

1 reference

http://europepmc.org/abstract/PMC/5704921

19 December 2017

published in

Nature Methods

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

page(s)

692-698

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

Programmable RNA Tracking in Live Cells with CRISPR/Cas9.

10 June 2020

cites work

1 reference

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Nucleic Acid Modifications in Regulation of Gene Expression

24 May 2018

1 reference

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5' UTR m(6)A Promotes Cap-Independent Translation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Dynamic m(6)A mRNA methylation directs translational control of heat shock response

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site

24 May 2018

1 reference

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Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Alternative 3' UTRs act as scaffolds to regulate membrane protein localization

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Structural imprints in vivo decode RNA regulatory mechanisms

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

APADB: a database for alternative polyadenylation and microRNA regulation events

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Dynamic RNA modifications in disease

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

CFIm25 links alternative polyadenylation to glioblastoma tumour suppression.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

The dynamic epitranscriptome: N6-methyladenosine and gene expression control

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N6-methyladenosine-dependent regulation of messenger RNA stability

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Mapping and significance of the mRNA methylome.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N6-methyl-adenosine modification in messenger and long non-coding RNA

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Nucleic acid modifications with epigenetic significance

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Global analysis reveals multiple pathways for unique regulation of mRNA decay in induced pluripotent stem cells

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

The cardiotonic steroid digitoxin regulates alternative splicing through depletion of the splicing factors SRSF3 and TRA2B

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

A novel synthesis and detection method for cap-associated adenosine modifications in mouse mRNA.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Genome-wide determination of a broad ESRP-regulated posttranscriptional network by high-throughput sequencing

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Mechanisms and consequences of alternative polyadenylation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

TopHat: discovering splice junctions with RNA-Seq

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Mapping of N6-methyladenosine residues in bovine prolactin mRNA

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

N6, O2'-dimethyladenosine a novel methylated ribonucleoside next to the 5' terminal of animal cell and virus mRNAs

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

HeLa cell RNA (2'-O-methyladenosine-N6-)-methyltransferase specific for the capped 5'-end of messenger RNA

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

An RNA map predicting Nova-dependent splicing regulation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5704921

Identification of N6,N6-Dimethyladenosine in Transfer RNA from Mycobacterium bovis Bacille Calmette-Guérin

15 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3898

Transcriptome-Wide Mapping of N6-Methyladenosine by m6A-Seq

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3898

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27376769

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMETH.3898

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27376769%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

PubMed publication ID

27376769

1 reference