Complex evolutionary relationships among four classes of modular RNA-binding splicing regulators in eukaryotes: the hnRNP, SR, ELAV-like and CELF proteins (Q46279817)

From Wikidata

Jump to navigation Jump to search

scientific article published on 24 November 2012

Language	Label	Description	Also known as
English	Complex evolutionary relationships among four classes of modular RNA-binding splicing regulators in eukaryotes: the hnRNP, SR, ELAV-like and CELF proteins	scientific article published on 24 November 2012

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Complex evolutionary relationships among four classes of modular RNA-binding splicing regulators in eukaryotes: the hnRNP, SR, ELAV-like and CELF proteins (English)

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Joseph A Rothnagel

5

object named as

Joseph A Rothnagel

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

author name string

Yue Hang Tang

1

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Siew Ping Han

2

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Karin S Kassahn

3

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Adam Skarshewski

4

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Ross Smith

6

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

publication date

24 November 2012

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Journal of Molecular Evolution

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

75

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

5-6

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

214-228

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

https://scigraph.springernature.com/pub.10.1007/s00239-012-9533-0

0 references

Comparative genomics and evolution of proteins involved in RNA metabolism

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Origin of multicellular eukaryotes - insights from proteome comparisons.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Genome-wide analysis of alternative pre-mRNA splicing

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

New insights into the auxiliary domains of eukaryotic RNA binding proteins.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Mechanisms of alternative pre-messenger RNA splicing

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Evolution of SR protein and hnRNP splicing regulatory factors

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Listening to silence and understanding nonsense: exonic mutations that affect splicing

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Studying alternative splicing regulatory networks through partial correlation analysis

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Genomic and structural aspects of protein evolution

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Reorganizing the protein space at the Universal Protein Resource (UniProt)

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

WebLogo: A Sequence Logo Generator

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The importance of CELF control: molecular and biological roles of the CUG-BP, Elav-like family of RNA-binding proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

hnRNP proteins and the biogenesis of mRNA

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Messenger-RNA-binding proteins and the messages they carry

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Structural trees for protein superfamilies

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

An efficient algorithm for large-scale detection of protein families

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Contributions of the RNA-binding and linker domains and RNA structure to the specificity and affinity of the nucleolin RBD12/NRE interaction.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

A conserved family of elav-like genes in vertebrates

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Convergent evolution of domain architectures (is rare).

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

A case of convergent evolution of nucleic acid binding modules

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Functional implications of the emergence of alternative splicing in hnRNP A/B transcripts

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Functional diversity of the hnRNPs: past, present and perspectives

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Quantifying the similarities within fold space

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Amino acid substitution matrices from protein blocks

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Infrastructure for the life sciences: design and implementation of the UniProt website

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Mass spectroscopy identifies the splicing-associated proteins, PSF, hnRNP H3, hnRNP A2/B1, and TLS/FUS as interacting partners of the ZNF198 protein associated with rearrangement in myeloproliferative disease

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Alternative splicing and evolution: diversification, exon definition and function

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Clustal W and Clustal X version 2.0

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The SR protein family of splicing factors: master regulators of gene expression

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

RNA-binding proteins: modular design for efficient function

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Entrez Gene: gene-centered information at NCBI

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

UniProt Knowledgebase: a hub of integrated protein data

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Alternative pre-mRNA splicing and proteome expansion in metazoans

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins)

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Understanding alternative splicing: towards a cellular code

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The complex world of post-transcriptional mechanisms: is their deregulation a common link for diseases? Focus on ELAV-like RNA-binding proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Immunopurification of heterogeneous nuclear ribonucleoprotein particles reveals an assortment of RNA-binding proteins.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The natural history of protein domains

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Large-scale proteomic analysis of the human spliceosome

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Comparative genomics of the eukaryotes

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Rapid functional diversification in the structurally conserved ELAV family of neuronal RNA binding proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Sequence logos: a new way to display consensus sequences

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Multiple RNA binding domains (RBDs) just don't add up

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The SR protein family

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Structure and RNA Interactions of the N-Terminal RRM Domains of PTB

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Building specificity with nonspecific RNA-binding proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The continuity of protein structure space is an intrinsic property of proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Function of alternative splicing

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

hnRNP A1 and hnRNP F modulate the alternative splicing of exon 11 of the insulin receptor gene

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

hnRNP A1 proofreads 3' splice site recognition by U2AF.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Identification of a (CUG)n triplet repeat RNA-binding protein and its expression in myotonic dystrophy

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Structural and functional analysis of RNA and TAP binding to SF2/ASF

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Evolution of function in protein superfamilies, from a structural perspective.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Protein family expansions and biological complexity

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the evolution of complexity

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Structure, function and evolution of multidomain proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Proton, carbon-13, and nitrogen-15 NMR assignments and global folding pattern of the RNA-binding domain of the human hnRNP C proteins

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

The evolutionary history of protein domains viewed by species phylogeny

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Comprehensive proteomic analysis of the human spliceosome

1 reference

https://api.crossref.org/works/10.1007%2FS00239-012-9533-0

21 January 2018

Practical limits of function prediction

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

hnRNP proteins and splicing control.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H, 13C, and 15N NMR assignments and global folding pattern of the RNA-binding domain of the human hnRNP C proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00239-012-9533-0

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q46279817&oldid=2103021221"