GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes (Q46309318)

21 December 2017

title

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes (English)

1 reference

21 December 2017

author

Natalia N. Ivanova

2

1 reference

21 December 2017

Nikos C. Kyrpides

7

1 reference

21 December 2017

Amrita Pati

1

Amrita Pati

1 reference

21 December 2017

5

Sean D Hooper

1 reference

21 December 2017

Galina Ovchinnikova

4

Galina Ovchinnikova

1 reference

21 December 2017

Athanasios Lykidis

6

Athanasios Lykidis

1 reference

21 December 2017

Natalia Mikhailova

3

Natalia Mikhailova

1 reference

21 December 2017

publication date

2 May 2010

1 reference

21 December 2017

published in

Nature Methods

1 reference

21 December 2017

volume

7

1 reference

21 December 2017

issue

6

1 reference

21 December 2017

page(s)

455-457

1 reference

21 December 2017

https://scigraph.springernature.com/pub.10.1038/nmeth.1457

exact match

0 references

cites work

Experimental determination of translational start sites resolves uncertainties in genomic open reading frame predictions - application to Mycobacterium tuberculosis.

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

Identifying bacterial genes and endosymbiont DNA with Glimmer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

Accuracy improvement for identifying translation initiation sites in microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

An unsupervised classification scheme for improving predictions of prokaryotic TIS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

A versatile computational pipeline for bacterial genome annotation improvement and comparative analysis, with Brucella as a use case

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

Discovery and revision of Arabidopsis genes by proteogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

The integrated microbial genomes system: an expanding comparative analysis resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

The RAST Server: rapid annotations using subsystems technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

AMIGene: Annotation of MIcrobial Genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1457

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/20436475

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mass spectrometry-based prokaryote gene annotation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20436475

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMETH.1457

1 reference

21 December 2017

release_sbqvjntesrh3lp3tflwxtipzya

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/sbqvjntesrh3lp3tflwxtipzya

mapped directly with Wikidata item

24 November 2022

based on heuristic

PubMed ID

20436475

1 reference

21 December 2017