Molecular modeling and dynamics studies of cytidylate kinase from Mycobacterium tuberculosis H37Rv. (Q46433297)

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4 January 2020

title

Molecular modeling and dynamics studies of cytidylate kinase from Mycobacterium tuberculosis H37Rv (English)

1 reference

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Mycobacterium tuberculosis

4 January 2020

main subject

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5

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4 January 2020

Walter De Azevedo

6

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4 January 2020

author name string

Rafael Andrade Caceres

1

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4 January 2020

Luís Fernando Saraiva Macedo Timmers

2

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4 January 2020

Ana Luiza Vivan

3

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4 January 2020

Cristopher Zandoná Schneider

4

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4 January 2020

Diogenes Santiago Santos

7

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4 January 2020

publication date

15 March 2008

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Journal of Molecular Modeling

4 January 2020

published in

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4 January 2020

volume

14

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4 January 2020

issue

5

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4 January 2020

page(s)

427-434

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Structure of Staphylococcus aureus cytidine monophosphate kinase in complex with cytidine 5'-monophosphate

4 January 2020

cites work

1 reference

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Prediction of the three-dimensional structure of human interleukin-7 by homology modeling.

21 January 2018

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12 December 2020

Derivation of rules for comparative protein modeling from a database of protein structure alignments

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Binding Energy, Specificity, and Enzymic Catalysis: The Circe Effect

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Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity

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From magic bullets back to the magic mountain: the rise of extensively drug-resistant tuberculosis

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Further development and validation of empirical scoring functions for structure-based binding affinity prediction

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12 December 2020

Controlling multidrug-resistant tuberculosis and access to expensive drugs: a rational framework

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12 December 2020

Solution structure and function of an essential CMP kinase of Streptococcus pneumoniae

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12 December 2020

Structural basis for specificity and potency of a flavonoid inhibitor of human CDK2, a cell cycle kinase.

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12 December 2020

Structure of shikimate kinase from Mycobacterium tuberculosis reveals the binding of shikimic acid

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12 December 2020

Dynamical properties of the soft sticky dipole-quadrupole-octupole water model: a molecular dynamics study

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12 December 2020

Crystal structure of shikimate kinase from Mycobacterium tuberculosis reveals the dynamic role of the LID domain in catalysis

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12 December 2020

Crystal structure of Mycobacterium tuberculosis shikimate kinase in complex with shikimic acid and an ATP analogue

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12 December 2020

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Molecular dynamics simulations of a protein-protein dimer: particle-mesh Ewald electrostatic model yields far superior results to standard cutoff model

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Molecular model for the binary complex of uropepsin and pepstatin

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Characterization of human UMP/CMP kinase and its phosphorylation of D- and L-form deoxycytidine analogue monophosphates

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GROMACS: fast, flexible, and free

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SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

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12 December 2020

Molecular models of cyclin-dependent kinase 1 complexed with inhibitors.

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12 December 2020

Refined structure of the complex between guanylate kinase and its substrate GMP at 2·0 Å resolution

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12 December 2020

Emergence of Mycobacterium tuberculosis with extensive resistance to second-line drugs--worldwide, 2000-2004.

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Global epidemiology of tuberculosis

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XDR-TB in South Africa: no time for denial or complacency

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Evolution and classification of P-loop kinases and related proteins

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Comparative protein modelling by satisfaction of spatial restraints

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12 December 2020