UClncR: Ultrafast and comprehensive long non-coding RNA detection from RNA-seq. (Q47123469)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

title

UClncR: Ultrafast and comprehensive long non-coding RNA detection from RNA-seq (English)

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8 April 2020

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corrigendum / erratum

Author Correction: UClncR: Ultrafast and comprehensive long non-coding RNA detection from RNA-seq.

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author

Zhifu Sun

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Xianfeng Chen

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Junwen Wang

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

author name string

Asha Nair

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Naresh Prodduturi

4

1 reference

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8 April 2020

Jean-Pierre Kocher

6

1 reference

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8 April 2020

language of work or name

English

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publication date

27 October 2017

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8 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

volume

7

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8 April 2020

issue

1

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8 April 2020

page(s)

14196

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Creative Commons Attribution 4.0 International

8 April 2020

copyright license

start time

27 October 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1038/s41598-017-14595-3

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cites work

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23 May 2018

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Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma

23 May 2018

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

23 May 2018

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The landscape of long noncoding RNAs in the human transcriptome

23 May 2018

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

23 May 2018

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Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer

23 May 2018

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Sebnif: an integrated bioinformatics pipeline for the identification of novel large intergenic noncoding RNAs (lincRNAs)--application in human skeletal muscle cells

23 May 2018

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featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

23 May 2018

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iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data

23 May 2018

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CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model

23 May 2018

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The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

23 May 2018

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Landscape of transcription in human cells

23 May 2018

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ChromHMM: automating chromatin-state discovery and characterization

23 May 2018

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Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

23 May 2018

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

23 May 2018

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Genome-wide computational identification and manual annotation of human long noncoding RNA genes

23 May 2018

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Strand-specific deep sequencing of the transcriptome

23 May 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

23 May 2018

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

23 May 2018

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

23 May 2018

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23 May 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

23 May 2018

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High-throughput long noncoding RNA profiling for diagnostic and prognostic markers in cancer: opportunities and challenges

23 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41598-017-14595-3

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41598-017-14595-3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29079769%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

1 reference