Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species (Q47566347)

4 February 2018

title

Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species (English)

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4 February 2018

Aspergillus novofumigatus

main subject

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Aspergillus campestris

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(1S,3S,5S,5'aR,6R,7R,7'S,10R,11S)-1',1',5,6,7',10-hexamethyl-3',8-dioxospiro[2,9,12,13-tetraoxatetracyclo[8.2.1.01,5.07,11]tridecane-3,6'-7,8,9,9a-tetrahydro-2-benzoxepine]-5'a-carbaldehyde

1 reference

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Blake Alexander Simmons

21

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4 February 2018

Mikael Rørdam Andersen

27

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4 February 2018

Jane L Nybo

Jane L Nybo

4

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Yudai Matsuda

Yudai Matsuda

8

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Tammi C Vesth

Tammi C Vesth

2

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Kerrie Barry

Kerrie Barry

18

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Scott E. Baker

Scott E Baker

26

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Thomas O Larsen

Thomas O Larsen

24

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Igor V. Grigoriev

Igor V Grigoriev

25

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Jens Christian Frisvad

Jens C Frisvad

3

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Anna Lipzen

13

Anna Lipzen

1 reference

4 February 2018

Uffe H Mortensen

23

Uffe H Mortensen

1 reference

4 February 2018

Inge Kjærbølling

1

Inge Kjærbølling

1 reference

4 February 2018

Sebastian Theobald

5

Sebastian Theobald

1 reference

4 February 2018

Alan Kuo

6

Alan Kuo

1 reference

4 February 2018

Stephen J Mondo

9

Stephen Mondo

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4 February 2018

Ellen K Lyhne

10

Ellen K Lyhne

1 reference

4 February 2018

Martin E Kogle

11

Martin E Kogle

1 reference

4 February 2018

Alicia Clum

12

Alicia Clum

1 reference

4 February 2018

Asaf Salamov

14

Asaf Salamov

1 reference

4 February 2018

Chew Yee Ngan

15

Chew Yee Ngan

1 reference

4 February 2018

Chris Daum

16

Chris Daum

1 reference

4 February 2018

Jennifer Chiniquy

17

Jennifer Chiniquy

1 reference

4 February 2018

Kurt Labutti

19

Kurt LaButti

1 reference

4 February 2018

Jon Magnuson

22

Jon K Magnuson

1 reference

4 February 2018

author name string

Paul Bowyer

7

1 reference

4 February 2018

Sajeet Haridas

20

1 reference

4 February 2018

language of work or name

English

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publication date

9 January 2018

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4 February 2018

full work available at URL

https://www.pnas.org/content/pnas/115/4/E753.full.pdf

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1073/pnas.1715954115?email=unpaywall_01@example.com

published in

Proceedings of the National Academy of Sciences of the United States of America

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4 February 2018

volume

115

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4 February 2018

issue

4

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4 February 2018

page(s)

E753-E761

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4 February 2018

https://api.unpaywall.org/v2/10.1073/pnas.1715954115?email=unpaywall_01@example.com

1 reference

19 March 2024

access restriction status

open access

1 reference

based on heuristic

inferred from online access status

cites work

Widespread adenine N6-methylation of active genes in fungi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Aspergillus is monophyletic: Evidence from multiple gene phylogenies and extrolites profiles

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Extrolites of Aspergillus fumigatus and Other Pathogenic Species in Aspergillus Section Fumigati

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Draft Genome Sequences of Two Closely Related Aflatoxigenic Aspergillus Species Obtained from the Ivory Coast

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Minimum Information about a Biosynthetic Gene cluster.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Chemodiversity in the genus Aspergillus.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

The Aspergillus fumigatus cell wall integrity signaling pathway: drug target, compensatory pathways, and virulence

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Secondary metabolite profiles and antifungal drug susceptibility of Aspergillus fumigatus and closely related species, Aspergillus lentulus, Aspergillus udagawae, and Aspergillus viridinutans

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Phylogeny, identification and nomenclature of the genus Aspergillus

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

The InterPro protein families database: the classification resource after 15 years

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

On K-peptide length in composition vector phylogeny of prokaryotes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Fungal type III polyketide synthases

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Identification of the first diphenyl ether gene cluster for pestheic acid biosynthesis in plant endophyte Pestalotiopsis fici

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Invasive aspergillosis caused by cryptic Aspergillus species: a report of two consecutive episodes in a patient with leukaemia.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Molecular genetic characterization of a cluster in A. terreus for biosynthesis of the meroterpenoid terretonin.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Insight into the structure-function relationship of the nonheme iron halogenases involved in the biosynthesis of 4-chlorothreonine --Thr3 from Streptomyces sp. OH-5093 and SyrB2 from Pseudomonas syringae pv. syringae B301DR.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Dereplication of microbial natural products by LC-DAD-TOFMS.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Re-identification of Aspergillus fumigatus sensu lato based on a new concept of species delimitation.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Secondary metabolic gene clusters: evolutionary toolkits for chemical innovation

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Secondary metabolism in fungi: does chromosomal location matter?

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

SMURF: Genomic mapping of fungal secondary metabolite clusters

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Fungal secondary metabolites - strategies to activate silent gene clusters

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Characterization of the Aspergillus ochraceoroseus aflatoxin/sterigmatocystin biosynthetic gene cluster.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Phylogenetic analysis of Aspergillus species using DNA sequences from four loci

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Polyphasic taxonomy of Aspergillus section Candidi based on molecular, morphological and physiological data.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Novofumigatonin, a new orthoester meroterpenoid from Aspergillus novofumigatus.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Terrequinone A biosynthesis through L-tryptophan oxidation, dimerization and bisprenylation

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Natural products of filamentous fungi: enzymes, genes, and their regulation

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Polyphasic taxonomy of Aspergillus fumigatus and related species

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Genome sequencing and analysis of Aspergillus oryzae

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Cryptic chlorination by a non-haem iron enzyme during cyclopropyl amino acid biosynthesis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Genes and molecules involved in Aspergillus fumigatus virulence

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

CVTree: a phylogenetic tree reconstruction tool based on whole genomes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Clustered pathway genes in aflatoxin biosynthesis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Versatile and open software for comparing large genomes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

The chalcone synthase superfamily of type III polyketide synthases

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Fast algorithms for large-scale genome alignment and comparison

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Cross-reactivity of IgE antibodies to allergens

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Alignment of whole genomes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Aspergillus fumigatus and aspergillosis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Functions encoded by pyrrolnitrin biosynthetic genes from Pseudomonas fluorescens

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Ochrindoles A-D: new bis-indolyl benzenoids from the sclerotia of Aspergillus ochraceus NRRL 3519.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5789934

Whole genome comparison of theA. fumigatusfamily

26 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1715954115

Aflatoxin biosynthesis gene clusters and flanking regions

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29317534

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Reconstitution of a fungal meroterpenoid biosynthesis reveals the involvement of a novel family of terpene cyclases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29317534

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

GHLORFLAVONIN, A NEW ANTIFUNGAL ANTIBIOTIC

1 reference

12 April 2024

https://opencitations.net/index/api/v1/citations/10.7164/ANTIBIOTICS.22.388

Identifiers

DOI

10.1073/PNAS.1715954115

1 reference

4 February 2018

PMC publication ID

5789934

0 references

1 reference

4 February 2018