Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RT-PCR. (Q48077902)

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4 January 2020

title

Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RT-PCR (English)

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4 January 2020

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4 January 2020

Kurt V Fagerstedt

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4 January 2020

Teemu H Teeri

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4 January 2020

Carl Gunnar Fossdal

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4 January 2020

Pekka Saranpää

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Liisa K Simola

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4 January 2020

author name string

Sanna Koutaniemi

1

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4 January 2020

Tino Warinowski

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Edward Alatalo

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Tapio Laakso

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Lars Paulin

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Stephen Rudd

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publication date

1 September 2007

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number of pages

18

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inferred from page(s)

published in

Plant Molecular Biology

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volume

65

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page(s)

311-328

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issue

3

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https://scigraph.springernature.com/pub.10.1007/s11103-007-9220-5

4 January 2020

exact match

0 references

cites work

Alterations in the biosynthesis of lignin in transgenic plants with chimeric genes for 4-coumarate: coenzyme A ligase.

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It's all GO for plant scientists.

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Conifer root and butt rot caused by Heterobasidion annosum (Fr.) Bref. s.l.

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Dual methylation pathways in lignin biosynthesis

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A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth.

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TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat

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Laccase down-regulation causes alterations in phenolic metabolism and cell wall structure in poplar.

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Genetic analysis of cinnamyl alcohol dehydrogenase in loblolly pine: single gene inheritance, molecular characterization and evolution

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Purification, cloning, and properties of an acyltransferase controlling shikimate and quinate ester intermediates in phenylpropanoid metabolism

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12 December 2020

Abnormal plant development and down-regulation of phenylpropanoid biosynthesis in transgenic tobacco containing a heterologous phenylalanine ammonia-lyase gene.

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12 December 2020

New routes for lignin biosynthesis defined by biochemical characterization of recombinant ferulate 5-hydroxylase, a multifunctional cytochrome P450-dependent monooxygenase.

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Silencing of hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesis

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Lignin formation in plants. The dilemma of linkage specificity

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12 December 2020

Coniferyl aldehyde 5-hydroxylation and methylation direct syringyl lignin biosynthesis in angiosperms

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12 December 2020

Characterization of basic p-coumaryl and coniferyl alcohol oxidizing peroxidases from a lignin-forming Picea abies suspension culture.

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12 December 2020

Antisense suppression of 4-coumarate:coenzyme A ligase activity in Arabidopsis leads to altered lignin subunit composition

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12 December 2020

Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms.

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12 December 2020

Cellular machinery of wood production: differentiation of secondary xylem in Pinus contorta var. latifolia.

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An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof

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Two cinnamoyl-CoA reductase (CCR) genes from Arabidopsis thaliana are differentially expressed during development and in response to infection with pathogenic bacteria

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12 December 2020

Lignification related enzymes in Picea abies suspension cultures

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12 December 2020

Peroxidases have more functions than a Swiss army knife.

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12 December 2020

Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana

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Multiplex real-time PCR for monitoring Heterobasidion annosum colonization in Norway spruce clones that differ in disease resistance

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12 December 2020

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12 December 2020

Secondary xylem-specific expression of caffeoyl-coenzyme A 3-O-methyltransferase plays an important role in the methylation pathway associated with lignin biosynthesis in loblolly pine.

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12 December 2020

A novel type of pathogen defense-related cinnamyl alcohol dehydrogenase.

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12 December 2020

Changes in secondary metabolism and deposition of an unusual lignin in the ref8 mutant of Arabidopsis

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12 December 2020

Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides).

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12 December 2020

Dirigent proteins in conifer defense: gene discovery, phylogeny, and differential wound- and insect-induced expression of a family of DIR and DIR-like genes in spruce (Picea spp.).

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12 December 2020

Purification and Characterization of Cinnamoyl-Coenzyme A:NADP Oxidoreductase in Eucalyptus gunnii

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12 December 2020

Light, the circadian clock, and sugar perception in the control of lignin biosynthesis

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12 December 2020

Diverse expression profiles of 21 rice peroxidase genes.

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12 December 2020

Quantitative relationship between phenylalanine ammonia-lyase levels and phenylpropanoid accumulation in transgenic tobacco identifies a rate-determining step in natural product synthesis

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A lignin-specific peroxidase in tobacco whose antisense suppression leads to vascular tissue modification

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A novel multifunctional O-methyltransferase implicated in a dual methylation pathway associated with lignin biosynthesis in loblolly pine

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12 December 2020

Mutant identification and characterization of the laccase gene family in Arabidopsis

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12 December 2020

CINNAMYL ALCOHOL DEHYDROGENASE-C and -D are the primary genes involved in lignin biosynthesis in the floral stem of Arabidopsis

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Gene discovery in the wood-forming tissues of poplar: analysis of 5, 692 expressed sequence tags.

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Reassessment of effects on lignification and vascular development in the irx4 Arabidopsis mutant.

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Real-time RT-PCR normalisation; strategies and considerations.

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The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

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Functional reclassification of the putative cinnamyl alcohol dehydrogenase multigene family in Arabidopsis

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12 December 2020

The class III peroxidase multigenic family in rice and its evolution in land plants.

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12 December 2020

Lignification in trees: indication of exclusive peroxidase participation

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12 December 2020

5-hydroxyconiferyl aldehyde modulates enzymatic methylation for syringyl monolignol formation, a new view of monolignol biosynthesis in angiosperms

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12 December 2020

Molecular cloning of 4-coumarate:coenzyme A ligase in loblolly pine and the roles of this enzyme in the biosynthesis of lignin in compression wood.

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A beta-glucosidase from lodgepole pine xylem specific for the lignin precursor coniferin

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12 December 2020

Involvement of AtLAC15 in lignin synthesis in seeds and in root elongation of Arabidopsis

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12 December 2020

Trends in lignin modification: a comprehensive analysis of the effects of genetic manipulations/mutations on lignification and vascular integrity

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Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation.

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The last step of syringyl monolignol biosynthesis in angiosperms is regulated by a novel gene encoding sinapyl alcohol dehydrogenase

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Functional genomics and cell wall biosynthesis in loblolly pine

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12 December 2020

Reduced Lignin Content and Altered Lignin Composition in Transgenic Tobacco Down-Regulated in Expression of L-Phenylalanine Ammonia-Lyase or Cinnamate 4-Hydroxylase

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Cloning, characterization and localization of three novel class III peroxidases in lignifying xylem of Norway spruce (Picea abies).

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Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.

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CYP98A3 from Arabidopsis thaliana is a 3'-hydroxylase of phenolic esters, a missing link in the phenylpropanoid pathway

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Temporal and Spatial Patterns of Gene Expression around Sites of Attempted Fungal Infection in Parsley Leaves.

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Isolation of the first putative peroxidase cDNA from a conifer and the local and systemic accumulation of related proteins upon pathogen infection.

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Novel characteristics and regulation of a divergent cinnamate 4-hydroxylase (CYP73A15) from French bean: engineering expression in yeast.

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12 December 2020

10.1007/S11103-007-9220-5

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4 January 2020

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