Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes (Q48080142)

8 February 2018

title

Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes (English)

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8 February 2018

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Hongyan Shan

1

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8 February 2018

Ning Zhang

2

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8 February 2018

Cuijing Liu

3

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8 February 2018

Guixia Xu

4

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8 February 2018

Jian Zhang

5

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8 February 2018

Zhiduan Chen

6

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8 February 2018

Hongzhi Kong

7

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8 February 2018

publication date

25 February 2007

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8 February 2018

Molecular Phylogenetics and Evolution

number of pages

16

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based on heuristic

inferred from page(s)

published in

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8 February 2018

volume

44

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8 February 2018

issue

1

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8 February 2018

page(s)

26-41

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8 February 2018

Phylogeny and divergence of basal angiosperms inferred from APETALA3- and PISTILLATA-like MADS-box genes

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Analysis of PEAM4, the pea AP1 functional homologue, supports a model for AP1-like genes controlling both floral meristem and floral organ identity in different plant species

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A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome

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Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

7 January 2021

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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

7 January 2021

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MADS-box genes expressed during tomato seed and fruit development

7 January 2021

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Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana

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The war of the whorls: genetic interactions controlling flower development

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And then there were many: MADS goes genomic

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Comprehensive interaction map of the Arabidopsis MADS Box transcription factors.

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The SEP4 gene of Arabidopsis thaliana functions in floral organ and meristem identity

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Negative regulation of the Arabidopsis homeotic gene AGAMOUS by the APETALA2 product.

7 January 2021

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Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis

7 January 2021

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Three MADS-box genes similar to APETALA1 and FRUITFULL from silver birch (Betula pendula).

7 January 2021

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Negative regulation of the SHATTERPROOF genes by FRUITFULL during Arabidopsis fruit development

7 January 2021

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Spatially and temporally regulated expression of the MADS-box gene AGL2 in wild-type and mutant arabidopsis flowers

7 January 2021

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Functional characterization of OsMADS18, a member of the AP1/SQUA subfamily of MADS box genes

7 January 2021

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Evolution of floral meristem identity genes. Analysis of Lolium temulentum genes related to APETALA1 and LEAFY of Arabidopsis

7 January 2021

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

7 January 2021

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Complexes of MADS-box proteins are sufficient to convert leaves into floral organs

7 January 2021

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The evolution of floral homeotic gene function

7 January 2021

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MADS-box gene evolution-structure and transcription patterns.

7 January 2021

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MIKC-type MADS-domain proteins: structural modularity, protein interactions and network evolution in land plants

7 January 2021

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Separation of genetic functions controlling organ identity in flowers

7 January 2021

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Molecular basis of the cauliflower phenotype in Arabidopsis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Expression of floral MADS-box genes in basal angiosperms: implications for the evolution of floral regulators.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Phylogeny and diversification of B-function MADS-box genes in angiosperms: evolutionary and functional implications of a 260-million-year-old duplication

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Highly heterogeneous rates of evolution in the SKP1 gene family in plants and animals: functional and evolutionary implications

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Evolutionary dynamics of genes controlling floral development.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Patterns of gene duplication and functional evolution during the diversification of the AGAMOUS subfamily of MADS box genes in angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

A simplified explanation for the frameshift mutation that created a novel C-terminal motif in the APETALA3 gene lineage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Eucalyptus has functional equivalents of the Arabidopsis AP1 gene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Patterns of molecular evolution among paralogous floral homeotic genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Identifying the Basal Angiosperm Node in Chloroplast Genome Phylogenies: Sampling One's Way Out of the Felsenstein Zone

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Two rice MADS domain proteins interact with OsMADS1.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Molecular characterization of the Arabidopsis floral homeotic gene APETALA1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Ternary complex formation between MADS-box transcription factors and the histone fold protein NF-YB.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Determination of the motif responsible for interaction between the rice APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The evolutionary dynamics of plant duplicate genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The MADS-box gene DEFH28 from Antirrhinum is involved in the regulation of floral meristem identity and fruit development

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Antiquity and evolution of the MADS-box gene family controlling flower development in plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The TRANSPARENT TESTA16 locus encodes the ARABIDOPSIS BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

B and C floral organ identity functions require SEPALLATA MADS-box genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

APETALA1 and SEPALLATA3 interact to promote flower development

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Conversion of leaves into petals in Arabidopsis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Assessing the redundancy of MADS-box genes during carpel and ovule development

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The MADS box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes fromAntirrhinumandArabidopsis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

MODELTEST: testing the model of DNA substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Identification and characterization of four chrysanthemum MADS-box genes, belonging to the APETALA1/FRUITFULL and SEPALLATA3 subfamilies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Missing links: the genetic architecture of flowers [correction of flower] and floral diversification

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The origin and diversification of angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Evolution of the APETALA3 and PISTILLATA lineages of MADS-box-containing genes in the basal angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Development of floral organ identity: stories from the MADS house

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Classification and phylogeny of the MADS-box multigene family suggest defined roles of MADS-box gene subfamilies in the morphological evolution of eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Toward the analysis of the petunia MADS box gene family by reverse and forward transposon insertion mutagenesis approaches: B, C, and D floral organ identity functions require SEPALLATA-like MADS box genes in petunia

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The origins of genomic duplications in Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Identification and characterization of three orchid MADS-box genes of the AP1/AGL9 subfamily during floral transition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Conservation and divergence in the AGAMOUS subfamily of MADS-box genes: evidence of independent sub- and neofunctionalization events

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

To B or Not to B a flower: the role of DEFICIENS and GLOBOSA orthologs in the evolution of the angiosperms.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Gene duplication and evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

Genome-wide expression profiling and identification of gene activities during early flower development in Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.02.016

10.1016/J.YMPEV.2007.02.016

7 January 2021

Identifiers

DOI

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8 February 2018

release_emwslso2hfh4tnvhxsv5cynfmm

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https://api.fatcat.wiki/v0/release/emwslso2hfh4tnvhxsv5cynfmm

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24 November 2022

based on heuristic

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8 February 2018