Single cell RNA sequencing of stem cell-derived retinal ganglion cells. (Q50045874)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

title

Single cell RNA sequencing of stem cell-derived retinal ganglion cells (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

single cell transcriptomics

16 March 2020

main subject

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Maciej Daniszewski

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Anne Senabouth

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Quan Nguyen

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Samuel W Lukowski

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Valentin M Sluch

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Alex W. Hewitt

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

author name string

Duncan E Crombie

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Tejal Kulkarni

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Jafar S Jabbari

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Xitiz Chamling

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Donald J Zack

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

Joseph E Powell

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

publication date

13 February 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

external data available at URL

16 March 2020

https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6108

1 reference

A curated database reveals trends in single-cell transcriptomics

11 February 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

volume

5

1 reference

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16 March 2020

page(s)

180013

1 reference

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Creative Commons Attribution 4.0 International

16 March 2020

copyright license

start time

13 February 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

cell culture

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

10x Genomics Chromium

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Massively parallel digital transcriptional profiling of single cells

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Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R

14 June 2018

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Enriched retinal ganglion cells derived from human embryonic stem cells

14 June 2018

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Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system

14 June 2018

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Two Pairs of ON and OFF Retinal Ganglion Cells Are Defined by Intersectional Patterns of Transcription Factor Expression

14 June 2018

1 reference

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Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Differentiation of human ESCs to retinal ganglion cells using a CRISPR engineered reporter cell line

14 June 2018

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Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

14 June 2018

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The types of retinal ganglion cells: current status and implications for neuronal classification

14 June 2018

1 reference

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Methods of Retinal Ganglion Cell Differentiation From Pluripotent Stem Cells

14 June 2018

1 reference

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Quantitative single-cell approaches to stem cell research

14 June 2018

1 reference

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Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

14 June 2018

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STAR: ultrafast universal RNA-seq aligner

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Differential expression analysis for sequence count data

14 June 2018

1 reference

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A human functional protein interaction network and its application to cancer data analysis

14 June 2018

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Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

14 June 2018

1 reference

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Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

14 June 2018

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Embryonic stem cell lines from human blastocysts: somatic differentiation in vitro

14 June 2018

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Embryonic stem cell lines derived from human blastocysts

14 June 2018

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Establishment in culture of pluripotential cells from mouse embryos

14 June 2018

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Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Lessons learned from the fate of AstraZeneca's drug pipeline: a five-dimensional framework

14 June 2018

1 reference

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Assembly of functionally integrated human forebrain spheroids

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Single-cell gene expression analysis reveals genetic associations masked in whole-tissue experiments

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5810423

Detecting outliers: Do not use standard deviation around the mean, use absolute deviation around the median

14 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSDATA.2018.13

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/SDATA.2018.13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29437159%20AND%20SRC:MED&resulttype=core&format=json

16 March 2020

PubMed publication ID

29437159

1 reference