Construction of a chloroplast protein interaction network and functional mining of photosynthetic proteins in Arabidopsis thaliana (Q50620086)

16 March 2018

title

Construction of a chloroplast protein interaction network and functional mining of photosynthetic proteins in Arabidopsis thaliana (English)

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16 March 2018

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Zhong-Nan Yang

16

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author name string

Qing-Bo Yu

1

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16 March 2018

Guang Li

2

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16 March 2018

Guan Wang

3

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16 March 2018

Jing-Chun Sun

4

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16 March 2018

Peng-Cheng Wang

5

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16 March 2018

Chen Wang

6

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16 March 2018

Hua-Ling Mi

7

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16 March 2018

Wei-Min Ma

8

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16 March 2018

Jian Cui

9

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16 March 2018

Yong-Lan Cui

10

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16 March 2018

Kang Chong

11

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16 March 2018

Yi-Xue Li

12

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16 March 2018

Yu-Hua Li

13

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16 March 2018

Zhongming Zhao

14

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16 March 2018

Tie-Liu Shi

15

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16 March 2018

publication date

1 October 2008

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16 March 2018

published in

Cell Research

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16 March 2018

volume

18

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16 March 2018

issue

10

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16 March 2018

page(s)

1007-1019

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16 March 2018

LumenP—A neural network predictor for protein localization in the thylakoid lumen

cites work

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Chloroplast research in the genomic age.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Chloroplast proteomics: potentials and challenges

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Integral membrane proteins of the chloroplast envelope: identification and subcellular localization of new transporters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Proteome map of the chloroplast lumen of Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

plprot: a comprehensive proteome database for different plastid types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Inferring genome-wide functional linkages in E. coli by combining improved genome context methods: comparison with high-throughput experimental data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A comprehensive two-hybrid analysis to explore the yeast protein interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A protein interaction map of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A map of the interactome network of the metazoan C. elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A human protein-protein interaction network: a resource for annotating the proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Protein interaction networks in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Comprehensive interaction map of the Arabidopsis MADS Box transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A predicted interactome for Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Protein interaction maps for model organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Conservation of gene order: a fingerprint of proteins that physically interact

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

The use of gene clusters to infer functional coupling

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Protein interaction maps for complete genomes based on gene fusion events

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Predicting protein function by genomic context: quantitative evaluation and qualitative inferences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Prediction of operons in microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Inference of protein function and protein linkages in Mycobacterium tuberculosis based on prokaryotic genome organization: a combined computational approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Missing value estimation methods for DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Systematic identification of human mitochondrial disease genes through integrative genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

A network of protein-protein interactions in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Network biology: understanding the cell's functional organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Exploring complex networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Functional and topological characterization of protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Global protein function prediction from protein-protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

PredSL: a tool for the N-terminal sequence-based prediction of protein subcellular localization

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Functional and structural genomics using PEDANT.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Functional annotation of the Arabidopsis genome using controlled vocabularies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Whole-genome annotation by using evidence integration in functional-linkage networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Refined phylogenetic profiles method for predicting protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

One-step transformation of yeast in stationary phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Expression of an N-terminal fragment of COP1 confers a dominant-negative effect on light-regulated seedling development in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Probabilistic model of the human protein-protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

7 January 2021

High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

7 January 2021

A probabilistic functional network of yeast genes

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

7 January 2021

A previously found thylakoid membrane protein of 14kDa (TMP14) is a novel subunit of plant photosystem I and is designated PSI-P.

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

7 January 2021

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

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Fluorescence and oxygen evolution from Chlorella pyrenoidosa

1 reference

https://api.crossref.org/works/10.1038%2FCR.2008.286

7 January 2021

Identifiers

DOI

10.1038/CR.2008.286

1 reference

16 March 2018

1 reference

16 March 2018