Genome-scale metabolic modeling and in silico analysis of lipid accumulating yeast Candida tropicalis for dicarboxylic acid production. (Q51494455)

http://europepmc.org/abstract/MED/26915092

5 April 2018

title

Genome-scale metabolic modeling and in silico analysis of lipid accumulating yeast Candida tropicalis for dicarboxylic acid production. (English)

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http://europepmc.org/abstract/MED/26915092

5 April 2018

main subject

Candida tropicalis

object named as

Candida tropicalis

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3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915092%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

author name string

Pranjul Mishra

1

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31 May 2020

Gyu-Yeon Park

2

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31 May 2020

Hee-Seok Lee

4

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31 May 2020

Hongweon Lee

5

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31 May 2020

Matthew Wook Chang

6

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31 May 2020

Chi Bun Ching

7

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31 May 2020

Jungoh Ahn

8

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31 May 2020

Dong-Yup Lee

9

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publication date

23 February 2016

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http://europepmc.org/abstract/MED/26915092

5 April 2018

published in

Biotechnology and Bioengineering

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31 May 2020

volume

113

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31 May 2020

page(s)

1993-2004

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31 May 2020

issue

9

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Metabolic flux analysis of hybridoma cells in different culture media using mass balances.

31 May 2020

cites work

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Constraint-based models predict metabolic and associated cellular functions.

21 January 2018

1 reference

A biochemical explanation for lipid accumulation in Candida 107 and other oleaginous micro-organisms

21 January 2018

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Evolution of pathogenicity and sexual reproduction in eight Candida genomes

21 January 2018

1 reference

Engineering the acetyl-CoA transportation system of candida tropicalis enhances the production of dicarboxylic acid.

21 January 2018

1 reference

Identification of a critical determinant that enables efficient fatty acid synthesis in oleaginous fungi

21 January 2018

1 reference

Identification and characterization of the CYP52 family of Candida tropicalis ATCC 20336, important for the conversion of fatty acids and alkanes to alpha,omega-dicarboxylic acids

21 January 2018

1 reference

Cloning and characterization of three fatty alcohol oxidase genes from Candida tropicalis strain ATCC 20336

21 January 2018

1 reference

Transformation of fatty acids catalyzed by cytochrome P450 monooxygenase enzymes of Candida tropicalis

21 January 2018

1 reference

The biomass objective function

21 January 2018

1 reference

Metabolic flux analysis of Candida tropicalis growing on xylose in an oxygen-limited chemostat.

21 January 2018

1 reference

Inhibition of the fungal fatty acid synthase type I multienzyme complex

21 January 2018

1 reference

From genomics to chemical genomics: new developments in KEGG

21 January 2018

1 reference

Gene analysis of an NADP-linked isocitrate dehydrogenase localized in peroxisomes of the n-alkane-assimilating yeast Candida tropicalis.

21 January 2018

1 reference

Metabolite essentiality elucidates robustness of Escherichia coli metabolism

21 January 2018

1 reference

Recent advances in reconstruction and applications of genome-scale metabolic models

21 January 2018

1 reference

Beta-oxidation of butyrate, the short-chain-length fatty acid, occurs in peroxisomes in the yeast Candida tropicalis

21 January 2018

1 reference

Software applications for flux balance analysis

21 January 2018

1 reference

In silico model-driven cofactor engineering strategies for improving the overall NADP(H) turnover in microbial cell factories.

21 January 2018

1 reference

In silico method for modelling metabolism and gene product expression at genome scale

21 January 2018

1 reference

Analysis of metabolic fluxes for better understanding of mechanisms related to lipid accumulation in oleaginous yeast Trichosporon cutaneum

21 January 2018

1 reference

A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica

21 January 2018

1 reference

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

21 January 2018

1 reference

Fungal gene expression on demand: an inducible, tunable, and metabolism-independent expression system for Aspergillus niger

21 January 2018

1 reference

Connecting extracellular metabolomic measurements to intracellular flux states in yeast

21 January 2018

1 reference

Optimizing genome-scale network reconstructions

21 January 2018

1 reference

Transcriptomic analyses during the transition from biomass production to lipid accumulation in the oleaginous yeast Yarrowia lipolytica

21 January 2018

1 reference

Reconstruction and in silico analysis of metabolic network for an oleaginous yeast, Yarrowia lipolytica

21 January 2018

1 reference

Metabolic engineering of Candida tropicalis for the production of long-chain dicarboxylic acids

21 January 2018

1 reference

The role of malic enzyme as the provider of NADPH in oleaginous microorganisms: a reappraisal and unsolved problems

21 January 2018

1 reference

Characterization of the alkane-inducible cytochrome P450 (P450alk) gene from the yeast Candida tropicalis: identification of a new P450 gene family.

21 January 2018

1 reference

Optimization based automated curation of metabolic reconstructions

21 January 2018

1 reference

BRENDA, the enzyme information system in 2011

21 January 2018

1 reference

Multistep Enzymatic Synthesis of Long-Chain α,ω-Dicarboxylic and ω-Hydroxycarboxylic Acids from Renewable Fatty Acids and Plant Oils

21 January 2018

1 reference

A protocol for generating a high-quality genome-scale metabolic reconstruction

21 January 2018

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A consensus sequence for long-chain fatty-acid alcohol oxidases from Candida identifies a family of genes involved in lipid omega-oxidation in yeast with homologues in plants and bacteria

21 January 2018

1 reference

The oxidative pentose phosphate pathway is the primary source of NADPH for lipid overproduction from glucose in Yarrowia lipolytica

21 January 2018

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Reconstruction and analysis of the genome-scale metabolic network of Candida glabrata

21 January 2018

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Reconstruction and analysis of a genome-scale metabolic model of the oleaginous fungus Mortierella alpina.

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/BIT.25955

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915092%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

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