Quantitative Proteome-Property Relationships (QPPRs). Part 1: finding biomarkers of organic drugs with mean Markov connectivity indices of spiral networks of blood mass spectra. (Q51865754)

From Wikidata

Jump to navigation Jump to search

scientific article published on 5 October 2008

Language	Label	Description	Also known as
English	Quantitative Proteome-Property Relationships (QPPRs). Part 1: finding biomarkers of organic drugs with mean Markov connectivity indices of spiral networks of blood mass spectra.	scientific article published on 5 October 2008

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Quantitative Proteome-Property Relationships (QPPRs). Part 1: finding biomarkers of organic drugs with mean Markov connectivity indices of spiral networks of blood mass spectra. (English)

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

1 reference

based on heuristic

inferred from title

Maykel Cruz-Monteagudo

1

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Cristian R. Munteanu

2

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Fernanda Borges

3

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Eugenio Uriarte

5

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Humberto González-Díaz

6

object named as

Humberto González-Díaz

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

author name string

M Natália D S Cordeiro

4

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

language of work or name

0 references

publication date

5 October 2008

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

Bioorganic & Medicinal Chemistry

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

16

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

22

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

9684-9693

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

De novo peptide sequencing via tandem mass spectrometry

1 reference

5 June 2022

https://opencitations.net/index/coci/api/v1/citations/10.1089/106652799318300

Computational chemistry development of a unified free energy Markov model for the distribution of 1300 chemicals to 38 different environmental or biological systems.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Canonical labeling of proteome maps.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Molecular Fingerprinting in Human Lung Cancer

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Serum proteomic patterns for detection of prostate cancer

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Comprehensive phenotyping and biological marker discovery

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Molecular search of new active drugs against Toxoplasma gondii

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Novel matrix invariants for characterization of changes of proteomics maps

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

From molecular to biological structure and back

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Proteomics, networks and connectivity indices.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Highly compact 2D graphical representation of DNA sequences.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

The human plasma proteome: a nonredundant list developed by combination of four separate sources

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Clinical proteomics: Written in blood

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Stochastic-based descriptors studying biopolymers biological properties: extended MARCH-INSIDE methodology describing antibacterial activity of lactoferricin derivatives.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Predicting subcellular localization of proteins by hybridizing functional domain composition and pseudo-amino acid composition.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Using stacked generalization to predict membrane protein types based on pseudo-amino acid composition

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Proteomics for the identification of new prostate cancer biomarkers

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

An algorithm for finding functional modules and protein complexes in protein-protein interaction networks

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

3D-chiral quadratic indices of the 'molecular pseudograph's atom adjacency matrix' and their application to central chirality codification: classification of ACE inhibitors and prediction of sigma-receptor antagonist activities

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Hepatitis C virus contact map prediction based on binary encoding strategy

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

The community structure of human cellular signaling network.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

A linear discrimination analysis based virtual screening of trichomonacidal lead-like compounds: Outcomes of in silico studies supported by experimental results

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

QSAR comparative study of Wiener descriptors for weighted molecular graphs

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Using optimized evidence-theoretic K-nearest neighbor classifier and pseudo-amino acid composition to predict membrane protein types

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Design, synthesis, and vasorelaxant and platelet antiaggregatory activities of coumarin-resveratrol hybrids

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On a four-dimensional representation of DNA primary sequences

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On the dependence of a characterization of proteomics maps on the number of protein spots considered

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

New agents active against Mycobacterium avium complex selected by molecular topology: a virtual screening method

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On a six-dimensional representation of RNA secondary structures.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Sequence database searches via de novo peptide sequencing by tandem mass spectrometry

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Computational chemistry comparison of stable/nonstable protein mutants classification models based on 3D and topological indices.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Proteomic analysis of global alteration of protein expression in squamous cell carcinoma of the esophagus

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Prediction of dihydrofolate reductase inhibition and selectivity using computational neural networks and linear discriminant analysis

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Four-color map representation of DNA or RNA sequences and their numerical characterization

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Predicting protein structural class with AdaBoost Learner.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

PepNovo: de novo peptide sequencing via probabilistic network modeling

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

3D-MEDNEs: an alternative "in silico" technique for chemical research in toxicology. 1. prediction of chemically induced agranulocytosis

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

A QSAR model for in silico screening of MAO-A inhibitors. Prediction, synthesis, and biological assay of novel coumarins.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Prediction of Protein Structural Classes

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

The sentinel within: exploiting the immune system for cancer biomarkers

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

PseudoViewer: web application and web service for visualizing RNA pseudoknots and secondary structures

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Human body fluid proteome analysis

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

SK&F 95654-induced acute cardiovascular toxicity in Sprague-Dawley rats--histopathologic, electron microscopic, and immunohistochemical studies

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Probabilistic neural network model for the in silico evaluation of anti-HIV activity and mechanism of action.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Predicting membrane protein type by functional domain composition and pseudo-amino acid composition

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Amino Acid Sequence Autocorrelation vectors and ensembles of Bayesian-Regularized Genetic Neural Networks for prediction of conformational stability of human lysozyme mutants.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Methods for reliability and uncertainty assessment and for applicability evaluations of classification- and regression-based QSARs

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

A novel approach for clustering proteomics data using Bayesian fast Fourier transform

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Amino acid sequence autocorrelation vectors and Bayesian-regularized genetic neural networks for modeling protein conformational stability: gene V protein mutants.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Prediction of the subcellular location of apoptosis proteins.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Probabilistic disease classification of expression-dependent proteomic data from mass spectrometry of human serum

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Predicting protein quaternary structure by pseudo amino acid composition

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Using cellular automata images and pseudo amino acid composition to predict protein subcellular location

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Toxicoproteomics: serum proteomic pattern diagnostics for early detection of drug induced cardiac toxicities and cardioprotection

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Using pseudo amino acid composition to predict protein subcellular location: approached with Lyapunov index, Bessel function, and Chebyshev filter

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On 3-D graphical representation of DNA primary sequences and their numerical characterization

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Reliability and uncertainty in the estimation of pKa by least squares nonlinear regression analysis of multiwavelength spectrophotometric pH titration data.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Classification of inhibitors of protein tyrosine phosphatase 1B using molecular structure based descriptors

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Markovian Backbone Negentropies: Molecular descriptors for protein research. I. Predicting protein stability in Arc repressor mutants

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

QSAR analysis of hypoglycemic agents using the topological indices.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Using fourier spectrum analysis and pseudo amino acid composition for prediction of membrane protein types

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Biomarker amplification by serum carrier protein binding

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Graphical approach to analyzing DNA sequences.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Shotgun proteomics and biomarker discovery.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Order from chaos: observing hormesis at the proteome level

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Chemometrics for QSAR with low sequence homology: Mycobacterial promoter sequences recognition with 2D-RNA entropies

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

A comparative study of proteomics maps using graph theoretical biodescriptors.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Prediction of apoptosis protein subcellular location using improved hybrid approach and pseudo-amino acid composition

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Overall connectivity--a next generation molecular connectivity

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Protein disorder prediction: implications for structural proteomics

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Local overfitting control via leverages

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Predicting enzyme subclass by functional domain composition and pseudo amino acid composition.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Recent progress in protein subcellular location prediction

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Quantitative characterizations of proteome: dependence on the number of proteins considered

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Use of proteomic patterns in serum to identify ovarian cancer

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Novel map descriptors for characterization of toxic effects in proteomics maps

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Medicinal chemistry and bioinformatics--current trends in drugs discovery with networks topological indices

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On characterization of dose variations of 2-D proteomics maps by matrix invariants

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

QSAR and classification of murine and human soluble epoxide hydrolase inhibition by urea-like compounds

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

New methodology of influential point detection in regression model building for the prediction of metabolic clearance rate of glucose.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

On 3-D graphical representation of proteomics maps and their numerical characterization

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Fast algorithm for peptide sequencing by mass spectroscopy

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

ELISA: structure-function inferences based on statistically significant and evolutionarily inspired observations

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Discrimination and selection of new potential antibacterial compounds using simple topological descriptors

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Computational chemistry approach to protein kinase recognition using 3D stochastic van der Waals spectral moments.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Recent advances on the role of topological indices in drug discovery research.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Evidence for downregulation of calcium signaling proteins in advanced mouse adenocarcinoma

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Digital coding of amino acids based on hydrophobic index

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

The use of serum levels of cardiac troponin T to compare the protective activity of dexrazoxane against doxorubicin- and mitoxantrone-induced cardiotoxicity

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

PRI-Modeler: extracting RNA structural elements from PDB files of protein-RNA complexes.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Novel characterization of proteomics maps by sequential neighborhoods of protein spots

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Discrimination and molecular design of new theoretical hypolipaemic agents using the molecular connectivity functions

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.BMC.2008.10.004

Prediction of protein cellular attributes using pseudo-amino acid composition

1 reference

7 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.BMC.2008.10.004

A computer program to aid the sequencing of peptides in collision-activated decomposition experiments.

1 reference

7 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.BMC.2008.10.004

Identifiers

10.1016/J.BMC.2008.10.004

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

14 April 2018

http://europepmc.org/abstract/MED/18951807

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q51865754&oldid=2222517639"