Modeling circadian oscillations with interlocking positive and negative feedback loops. (Q52017850)

http://europepmc.org/abstract/MED/11517254

19 April 2018

title

Modeling circadian oscillations with interlocking positive and negative feedback loops (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

zinc finger white collar protein WC2

12 May 2020

main subject

circadian rhythm

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white collar 1 protein, variant 2

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white collar 1 protein, variant 1

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white collar 1 protein

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white collar 1 protein, variant 3

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period clock protein FRQ

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period clock protein FRQ, variant 2

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period clock protein FRQ, variant 1

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author name string

P Smolen

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

12 May 2020

D A Baxter

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

12 May 2020

J H Byrne

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

12 May 2020

language of work or name

English

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publication date

1 September 2001

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http://europepmc.org/abstract/MED/11517254

19 April 2018

published in

Journal of Neuroscience

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12 May 2020

volume

21

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12 May 2020

issue

17

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12 May 2020

page(s)

6644-6656

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PER and TIM inhibit the DNA binding activity of a Drosophila CLOCK-CYC/dBMAL1 heterodimer without disrupting formation of the heterodimer: a basis for circadian transcription

12 May 2020

cites work

1 reference

12 December 2020

Isolation of timeless by PER protein interaction: defective interaction between timeless protein and long-period mutant PERL

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12 December 2020

Interlocked Feedback Loops Within the Drosophila Circadian Oscillator

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12 December 2020

Closing the circadian loop: CLOCK-induced transcription of its own inhibitors per and tim.

1 reference

12 December 2020

Microbial circadian oscillatory systems in Neurospora and Synechococcus: models for cellular clocks.

1 reference

12 December 2020

Effect of constant light and circadian entrainment of perS flies: evidence for light-mediated delay of the negative feedback loop in Drosophila.

1 reference

12 December 2020

Circadian clockwork: two loops are better than one.

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12 December 2020

mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop

1 reference

12 December 2020

Circadian fluctuations of period protein immunoreactivity in the CNS and the visual system of Drosophila.

1 reference

12 December 2020

Circadian regulation of a Drosophila homolog of the mammalian Clock gene: PER and TIM function as positive regulators

1 reference

12 December 2020

Effects of macromolecular transport and stochastic fluctuations on dynamics of genetic regulatory systems

1 reference

12 December 2020

A model for circadian rhythms in Drosophila incorporating the formation of a complex between the PER and TIM proteins

1 reference

12 December 2020

Neurospora wc-1 and wc-2: transcription, photoresponses, and the origins of circadian rhythmicity

1 reference

12 December 2020

Interacting molecular loops in the mammalian circadian clock

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12 December 2020

Nuclear localization is required for function of the essential clock protein FRQ.

1 reference

12 December 2020

Post-transcriptional regulation contributes to Drosophila clock gene mRNA cycling

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12 December 2020

Theoretical models for circadian rhythms in Neurospora and Drosophila.

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12 December 2020

Temporal phosphorylation of the Drosophila period protein

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12 December 2020

double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation

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12 December 2020

Phosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock

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12 December 2020

A light-entrainment mechanism for the Drosophila circadian clock

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12 December 2020

Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY.

1 reference

12 December 2020

Modeling the molecular regulatory mechanism of circadian rhythms in Drosophila

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12 December 2020

Molecular bases for circadian clocks

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12 December 2020

Role of a white collar-1-white collar-2 complex in blue-light signal transduction

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12 December 2020

Dissection of a circadian oscillation into discrete domains

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12 December 2020

The Drosophila CLOCK protein undergoes daily rhythms in abundance, phosphorylation, and interactions with the PER-TIM complex.

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12 December 2020

The Goodwin model: simulating the effect of cycloheximide and heat shock on the sporulation rhythm of Neurospora crassa

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12 December 2020

Interconnected feedback loops in the Neurospora circadian system

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12 December 2020

Oscillatory behavior in enzymatic control processes

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12 December 2020

Regulation of nuclear entry of the Drosophila clock proteins period and timeless.

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12 December 2020

A mathematical model for the intracellular circadian rhythm generator.

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12 December 2020

The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon

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12 December 2020

dCLOCK is present in limiting amounts and likely mediates daily interactions between the dCLOCK-CYC transcription factor and the PER-TIM complex

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12 December 2020

Delay model of the circadian pacemaker.

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12 December 2020

Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora.

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12 December 2020

Circadian rhythms in Neurospora crassa: lipid deficiencies restore robust rhythmicity to null frequency and white-collar mutants.

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12 December 2020

Light-induced degradation of TIMELESS and entrainment of the Drosophila circadian clock.

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12 December 2020

Differential regulation of circadian pacemaker output by separate clock genes in Drosophila

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12 December 2020

Circadian clocks limited by noise

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12 December 2020

Circadian rhythms: new functions for old clock genes.

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12 December 2020

Modeling transcriptional control in gene networks--methods, recent results, and future directions

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12 December 2020

Mathematical modeling of gene networks

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12 December 2020

A simple model of circadian rhythms based on dimerization and proteolysis of PER and TIM.

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12 December 2020

WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora

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12 December 2020

Block in nuclear localization of period protein by a second clock mutation, timeless

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12 December 2020

Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript

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12 December 2020

CYCLE is a second bHLH-PAS clock protein essential for circadian rhythmicity and transcription of Drosophila period and timeless

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12 December 2020

10.1523/JNEUROSCI.21-17-06644.2001

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

12 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6763090&resulttype=core&format=json

12 May 2020

1 reference