Characterizing the structural features of RNA/RNA interactions of the F-plasmid FinOP fertility inhibition system. (Q52550537)

3 May 2018

title

Characterizing the structural features of RNA/RNA interactions of the F-plasmid FinOP fertility inhibition system. (English)

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3 May 2018

author

Laura Frost

5

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3 May 2018

author name string

Michael J Gubbins

1

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3 May 2018

David C Arthur

2

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Alexandru F Ghetu

3

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3 May 2018

J N Mark Glover

4

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3 May 2018

language of work or name

English

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publication date

14 May 2003

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3 May 2018

Journal of Biological Chemistry

published in

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volume

278

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issue

30

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page(s)

27663-27671

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3 May 2018

Antisense-RNA regulation and RNA interference

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Control of cole 1 plasmid replication: The process of binding of RNA I to the primer transcript

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The transcriptional control of fertility in F-like plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Structural and functional analyses of the FinP antisense RNA regulatory system of the F conjugative plasmid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Nucleotide sequences of five IncF plasmid finP alleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Transcript analysis of the plasmid R100 traJ and finP genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Repression and derepression of conjugation of plasmid R1 by wild-type and mutated finP antisense RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The FinOP repressor system of plasmid R1: analysis of the antisense RNA control of traJ expression and conjugative DNA transfer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Two classes of Flac mutants insensitive to transfer inhibition by an F-like R factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Repressor gene finO in plasmids R100 and F: constitutive transfer of plasmid F is caused by insertion of IS3 into F finO.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Differential levels of fertility inhibition among F-like plasmids are related to the cellular concentration of finO mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The site of action of the F transfer inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Crystal structure of the bacterial conjugation repressor finO

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

In vitro analysis of the interaction between the FinO protein and FinP antisense RNA of F-like conjugative plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Degradation of FinP antisense RNA from F-like plasmids: the RNA-binding protein, FinO, protects FinP from ribonuclease E

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

finP and fisO mutations in FinP anti-sense RNA suggest a model for FinOP action in the repression of bacterial conjugation by the Flac plasmid JCFL0.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Antisense RNA control in bacteria, phages, and plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

A rapid alkaline extraction procedure for screening recombinant plasmid DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The Molecular Biology Database Collection: 2003 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Copy number control of IncIalpha plasmid ColIb-P9 by competition between pseudoknot formation and antisense RNA binding at a specific RNA site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Antisense RNA control of plasmid R1 replication. The dominant product of the antisense rna-mrna binding is not a full RNA duplex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Bulged-out nucleotides in an antisense RNA are required for rapid target RNA binding in vitro and inhibition in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Interaction between the antisense and target RNAs involved in the regulation of IncB plasmid replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Bulged residues promote the progression of a loop-loop interaction to a stable and inhibitory antisense-target RNA complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Structural requirement for the two-step dimerization of human immunodeficiency virus type 1 genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Two basic regions of NCp7 are sufficient for conformational conversion of HIV-1 dimerization initiation site from kissing-loop dimer to extended-duplex dimer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Identification of a high affinity nucleocapsid protein binding element within the Moloney murine leukemia virus Psi-RNA packaging signal: implications for genome recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Complex formed by complementary RNA stem-loops and its stabilization by a protein: Function of ColE1 Rom protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

IS1-mediated tandem duplication of plasmid pBR322. Dependence on recA and on DNA polymerase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Regulation of the regulatory gene for the arabinose pathway, araC

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

The FinO Repressor of Bacterial Conjugation Contains Two RNA Binding Regions†

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Analysis of the major domains of the F fertility inhibition protein, FinO

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

FinOP repression of the F plasmid involves extension of the half-life of FinP antisense RNA by FinO

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Antisense RNAs everywhere?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with ColE1 Rom protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Kissing and RNA stability in antisense control of plasmid replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Antisense RNA regulation in prokaryotes: rapid RNA/RNA interaction facilitated by a general U-turn loop structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Structural basis for binding of the plasmid ColIb-P9 antisense Inc RNA to its target RNA with the 5'-rUUGGCG-3' motif in the loop sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

Specificities of IncF plasmid conjugation genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

NCp7 activates HIV-1Lai RNA dimerization by converting a transient loop-loop complex into a stable dimer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M303186200

21 January 2018

Identifiers

DOI

10.1074/JBC.M303186200

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3 May 2018

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3 May 2018