Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes. (Q53378784)

13 May 2018

title

Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes. (English)

1 reference

13 May 2018

author

Klaus Mayer

4

1 reference

13 May 2018

Miguel A Aranda

5

1 reference

13 May 2018

Livia Donaire

object named as

Livia Donaire

1

0 references

author name string

Yu Wang

2

1 reference

13 May 2018

Daniel Gonzalez-Ibeas

3

1 reference

13 May 2018

César Llave

6

1 reference

13 May 2018

language of work or name

English

0 references

publication date

7 August 2009

1 reference

13 May 2018

number of pages

12

1 reference

based on heuristic

inferred from page(s)

published in

Virology

1 reference

13 May 2018

volume

392

1 reference

13 May 2018

issue

2

1 reference

13 May 2018

page(s)

203-214

1 reference

13 May 2018

Molecular characterization of geminivirus-derived small RNAs in different plant species

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

microRNA-directed phasing during trans-acting siRNA biogenesis in plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

A two-hit trigger for siRNA biogenesis in plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

The diversity of RNA silencing pathways in plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Widespread translational inhibition by plant miRNAs and siRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Nuclear gene silencing directs reception of long-distance mRNA silencing in Arabidopsis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Short interfering RNA accumulation correlates with host recovery in DNA virus-infected hosts, and gene silencing targets specific viral sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Antiviral immunity directed by small RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Structural and genetic requirements for the biogenesis of tobacco rattle virus-derived small interfering RNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

The complex interplay between plant viruses and host RNA-silencing pathways.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

A simplified method for cloning of short interfering RNAs from Brassica juncea infected with Turnip mosaic potyvirus and Turnip crinkle carmovirus.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Evidence for targeting common siRNA hotspots and GC preference by plant Dicer-like proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Argonaute proteins: key players in RNA silencing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Computational identification of plant microRNAs and their targets, including a stress-induced miRNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Genome-wide profiling and analysis of Arabidopsis siRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

7 January 2021

Sorting out small RNAs

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Virus counterdefense: diverse strategies for evading the RNA-silencing immunity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Elucidation of the small RNA component of the transcriptome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Silencing suppressor activity of the Tobacco rattle virus-encoded 16-kDa protein and interference with endogenous small RNA-guided regulatory pathways.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

The dialogue between viruses and hosts in compatible interactions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Criteria for annotation of plant MicroRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Small RNAs in viral infection and host defense

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Plant virus-derived small interfering RNAs originate predominantly from highly structured single-stranded viral RNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Distinct populations of primary and secondary effectors during RNAi in C. elegans

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Molecular bases of viral RNA targeting by viral small interfering RNA-programmed RISC.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Small RNA deep sequencing reveals role for Arabidopsis thaliana RNA-dependent RNA polymerases in viral siRNA biogenesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

RETRACTED: Secondary siRNAs result from unprimed RNA synthesis and form a distinct class

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Silence from within: endogenous siRNAs and miRNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Short defective interfering RNAs of tombusviruses are not targeted but trigger post-transcriptional gene silencing against their helper virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Size selective recognition of siRNA by an RNA silencing suppressor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Use, tolerance and avoidance of amplified RNA silencing by plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Genetic and functional diversification of small RNA pathways in plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Analysis of the involvement of an inducible Arabidopsis RNA-dependent RNA polymerase in antiviral defense

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

Mfold web server for nucleic acid folding and hybridization prediction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.07.005

10.1016/J.VIROL.2009.07.005

7 January 2021

Identifiers

DOI

1 reference

13 May 2018

1 reference

13 May 2018