Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3'-end maturation and intron degradation. (Q54598720)

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English	Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3'-end maturation and intron degradation.	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3'-end maturation and intron degradation. (English)

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

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based on heuristic

inferred from title

mutational analysis

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based on heuristic

inferred from title

1

object named as

Arnaud Germain

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Europe PubMed Central

PubMed publication ID

1 June 2018

author name string

Shira Herlich

2

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

Shirley Larom

3

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

Sang Hu Kim

4

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

Gadi Schuster

5

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

David B Stern

6

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

publication date

25 May 2011

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Europe PubMed Central

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1 June 2018

http://europepmc.org/abstract/MED/21466602

The Plant Journal

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1 June 2018

http://europepmc.org/abstract/MED/21466602

67

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

3

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

381-394

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Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

Arabidopsis orthologs of maize chloroplast splicing factors promote splicing of orthologous and species-specific group II introns.

1 reference

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Tissue-dependent plastid RNA splicing in maize: transcripts from four plastid genes are predominantly unspliced in leaf meristems and roots

1 reference

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21 January 2018

Plastid transcription activity and DNA copy number increase early in barley chloroplast development

1 reference

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RNR1, a 3'-5' exoribonuclease belonging to the RNR superfamily, catalyzes 3' maturation of chloroplast ribosomal RNAs in Arabidopsis thaliana.

1 reference

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Mammalian polynucleotide phosphorylase is an intermembrane space RNase that maintains mitochondrial homeostasis

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Promiscuous exoribonucleases of Escherichia coli

1 reference

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(p)ppGpp inhibits polynucleotide phosphorylase from streptomyces but not from Escherichia coli and increases the stability of bulk mRNA in Streptomyces coelicolor

1 reference

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21 January 2018

Relaxed transcription in Arabidopsis mitochondria is counterbalanced by RNA stability control mediated by polyadenylation and polynucleotide phosphorylase

1 reference

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21 January 2018

Mutational analysis of polynucleotide phosphorylase from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

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Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors

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Polyadenylation of three classes of chloroplast RNA in Chlamydomonas reinhadtii

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The archaeal exosome core is a hexameric ring structure with three catalytic subunits

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Abnormal physiological and molecular mutant phenotypes link chloroplast polynucleotide phosphorylase to the phosphorus deprivation response in Arabidopsis

1 reference

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21 January 2018

Comparative and functional anatomy of group II catalytic introns--a review

1 reference

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21 January 2018

Polynucleotide phosphorylase functions both as a 3' right-arrow 5' exonuclease and a poly(A) polymerase in Escherichia coli

1 reference

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21 January 2018

Web-based primer design for single nucleotide polymorphism analysis.

1 reference

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Crystal Structure of Escherichia coli Polynucleotide Phosphorylase Core Bound to RNase E, RNA and Manganese: Implications for Catalytic Mechanism and RNA Degradosome Assembly

1 reference

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21 January 2018

AtmtPNPase is required for multiple aspects of the 18S rRNA metabolism in Arabidopsis thaliana mitochondria.

1 reference

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21 January 2018

Two exoribonucleases act sequentially to process mature 3'-ends of atp9 mRNAs in Arabidopsis mitochondria

1 reference

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21 January 2018

Site-specific binding of a PPR protein defines and stabilizes 5' and 3' mRNA termini in chloroplasts

1 reference

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21 January 2018

Analysis of the human polynucleotide phosphorylase (PNPase) reveals differences in RNA binding and response to phosphate compared to its bacterial and chloroplast counterparts

1 reference

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21 January 2018

Plastid cues posttranscriptionally regulate the accumulation of key enzymes of the methylerythritol phosphate pathway in Arabidopsis.

1 reference

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21 January 2018

RNA polyadenylation and decay in mitochondria and chloroplasts

1 reference

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21 January 2018

Crystal structure of Escherichia coli PNPase: Central channel residues are involved in processive RNA degradation

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https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Stable PNPase RNAi silencing: its effect on the processing and adenylation of human mitochondrial RNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Detection and characterization of polyadenylated RNA in Eukarya, Bacteria, Archaea, and organelles

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Polynucleotide phosphorylase and the archaeal exosome as poly(A)-polymerases

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Action of RNase II and polynucleotide phosphorylase against RNAs containing stem-loops of defined structure

1 reference

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21 January 2018

Control of plastid gene expression: 3' inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Chloroplast RNA metabolism

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

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A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

21 January 2018

Running rings around RNA: a superfamily of phosphate-dependent RNases.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04601.X

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Large-scale discovery of induced point mutations with high-throughput TILLING.

1 reference

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Lariat formation and a hydrolytic pathway in plant chloroplast group II intron splicing

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PNPase activity determines the efficiency of mRNA 3'-end processing, the degradation of tRNA and the extent of polyadenylation in chloroplasts

1 reference

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Knockout of the plastid RNase E leads to defective RNA processing and chloroplast ribosome deficiency.

1 reference

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PNPASE regulates RNA import into mitochondria

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Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts

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Domain analysis of the chloroplast polynucleotide phosphorylase reveals discrete functions in RNA degradation, polyadenylation, and sequence homology with exosome proteins

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Integration of chloroplast nucleic acid metabolism into the phosphate deprivation response in Chlamydomonas reinhardtii

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Nucleus-encoded plastid sigma factor SIG3 transcribes specifically the psbN gene in plastids

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Polyadenylation in Arabidopsis and Chlamydomonas organelles: the input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase.

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Identifiers

10.1111/J.1365-313X.2011.04601.X

1 reference

Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 June 2018

http://europepmc.org/abstract/MED/21466602

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