AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture (Q56655129)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30239679%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

title

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture (English)

1 reference

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23 April 2020

0 references

1 reference

Jacqueline D Campbell

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1 reference

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23 April 2020

Tanya Z Berardini

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23 April 2020

Christine G Elsik

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Nic Herndon

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Marie-Angélique Laporte

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James M Reecy

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Taner Z Sen

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Christopher J. Mungall

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Margaret Woodhouse

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Deepak Unni

1 reference

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Sushma Naithani

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Monica C Munoz-Torres

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Nathan Dunn

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24

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Monica Poelchau

1 reference

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Carson Andorf

1 reference

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Laurel Cooper

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David Grant

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22

Zhi-Liang Hu

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Clement Jonquet

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Pierre Larmande

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Gerard Lazo

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Rex Nelson

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Leonore Reiser

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Doreen Ware

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Jill Wegrzyn

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Ramona Walls

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Naama Menda

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Elizabeth Arnaud

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Lisa Harper

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Sook Jung

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Clayton Birkett

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Steve Cannon

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James Carson

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Andrew Farmer

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Carissa Park

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Sabarinath Subramaniam

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Marcela Karey Tello-Ruiz

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Liya Wang

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Jing Yu

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Doreen Main

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language of work or name

English

0 references

publication date

1 January 2018

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number of pages

32

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published in

Database

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volume

2018

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Creative Commons Attribution 4.0 International

23 April 2020

page(s)

1-32

0 references

copyright license

start time

18 September 2018

1 reference

April 2022 Public Data File from Crossref

0 references

1 reference

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1 reference

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1 reference

12 December 2020

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1 reference

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1 reference

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InterMOD: integrated data and tools for the unification of model organism research

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Identifiers

DOI

10.1093/DATABASE/BAY088

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30239679%20AND%20SRC:MED&resulttype=core&format=json

journals/biodb/HarperCCJPWAABB18

23 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30239679%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

1 reference