Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site (Q56688062)

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8 November 2019

title

Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site (English)

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8 November 2019

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S A Strobel

1

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8 November 2019

L Ortoleva-Donnelly

2

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8 November 2019

S P Ryder

3

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8 November 2019

J H Cate

4

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8 November 2019

E Moncoeur

5

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8 November 2019

publication date

1 January 1998

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Nature structural biology

8 November 2019

number of pages

7

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based on heuristic

inferred from page(s)

published in

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8 November 2019

volume

5

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8 November 2019

issue

1

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8 November 2019

page(s)

60-66

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RNA seeing double: close-packing of helices in RNA tertiary structure

8 November 2019

cites work

1 reference

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One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity

21 January 2018

1 reference

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Exocyclic amine of the conserved G.U pair at the cleavage site of the Tetrahymena ribozyme contributes to 5'-splice site selection and transition state stabilization

21 January 2018

1 reference

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Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping

21 January 2018

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RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme

21 January 2018

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Nucleoside phosphorothioates

21 January 2018

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A simplified procedure for synthesizing nucleoside 1-thiotriphosphates: dATP alpha S, dGTP alpha S, UTP alpha S, and dTTP alpha S.

21 January 2018

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Structure of the P1 Helix from Group I Self-splicing Introns

21 January 2018

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A major family of motifs involving G.A mismatches in ribosomal RNA.

21 January 2018

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GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain

21 January 2018

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Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.

21 January 2018

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RNA-catalysed synthesis of complementary-strand RNA

21 January 2018

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Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

21 January 2018

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Minor groove recognition of the conserved G.U pair at the Tetrahymena ribozyme reaction site

31 March 2020

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Splice-site selection by a self-splicing RNA of Tetrahymena

31 March 2020

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The Tetrahymena ribozyme acts like an RNA restriction endonuclease

31 March 2020

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Evidence for processivity and two-step binding of the RNA substrate from studies of J1/2 mutants of the Tetrahymena ribozyme

31 March 2020

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Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods

31 March 2020

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Translocation of an RNA duplex on a ribozyme

31 March 2020

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Alteration of substrate specificity for the endoribonucleolytic cleavage of RNA by the Tetrahymena ribozyme

31 March 2020

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Tertiary interactions with the internal guide sequence mediate docking of the P1 helix into the catalytic core of the Tetrahymena ribozyme

31 March 2020

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Movement of the Guide Sequence During RNA Catalysis by a Group I Ribozyme

31 March 2020

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Crystal structure of a group I ribozyme domain: principles of RNA packing

31 March 2020

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Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme

31 March 2020

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Enzymatic synthesis of 2'-modified nucleic acids: identification of important phosphate and ribose moieties in RNase P substrates

31 March 2020

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Mechanistic investigations of a ribozyme derived from the Tetrahymena group I intron: insights into catalysis and the second step of self-splicing

31 March 2020

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DNA and RNA sequence determination based on phosphorothioate chemistry

31 March 2020

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Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics

31 March 2020

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A comparative database of group I intron structures

31 March 2020

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Replacement of the conserved G.U with a G-C pair at the cleavage site of the Tetrahymena ribozyme decreases binding, reactivity, and fidelity

31 March 2020

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Dissection of the role of the conserved G.U pair in group I RNA self-splicing

31 March 2020

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RNA structure, not sequence, determines the 5' splice-site specificity of a group I intron

31 March 2020

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Effects of GA mismatches on the structure and thermodynamics of RNA internal loops

31 March 2020

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Metal coordination sites that contribute to structure and catalysis in the group I intron from Tetrahymena

31 March 2020

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A mutant T7 RNA polymerase as a DNA polymerase.

31 March 2020

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inferred from DOI database lookup

7 January 2021

based on heuristic

Frequent use of the same tertiary motif by self-folding RNAs

1 reference

https://api.crossref.org/works/10.1038%2FNSB0198-60

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NSB0198-60

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9437431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference