Standard methods for research on Apis mellifera gut symbionts (Q57230462)

4

object named as

Waldan K Kwong

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author name string

Philipp Engel

1

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Rosalind R James

2

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Ryuichi Koga

3

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Quinn S McFrederick

Journal of Apicultural Research and Bee World

5

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publication date

January 2013

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published in

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volume

52

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issue

4

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page(s)

1-24

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cites work

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Bifidobacterium asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut

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An Ordination of the Upland Forest Communities of Southern Wisconsin

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Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

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Estimating population diversity with CatchAll.

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PyNAST: a flexible tool for aligning sequences to a template alignment

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QIIME allows analysis of high-throughput community sequencing data

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Pathogen webs in collapsing honey bee colonies

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A metagenomic survey of microbes in honey bee colony collapse disorder

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Illumina-based analysis of microbial community diversity

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Standard methods for American foulbrood research

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Search and clustering orders of magnitude faster than BLAST

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UCHIME improves sensitivity and speed of chimera detection

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Lactobacillus kunkeei sp. nov.: a spoilage organism associated with grape juice fermentations

21 January 2018

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Frischella perrara gen. nov., sp. nov., a gammaproteobacterium isolated from the gut of the honeybee, Apis mellifera

21 January 2018

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Functional diversity within the simple gut microbiota of the honey bee.

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Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

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Antagonistic interactions between honey bee bacterial symbionts and implications for disease

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Standard methods for molecular research inApis mellifera

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Standard methods for Nosema research

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Acetone preservation: a practical technique for molecular analysis

21 January 2018

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Bacteria belonging to the genus Bacillus isolated from selected organs of queen honey bees, Apis mellifera.

21 January 2018

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Yeasts isolated from honey bees, Apis mellifera, fed 2,4-D and antibiotics.

21 January 2018

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

21 January 2018

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Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

21 January 2018

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Metagenomics: application of genomics to uncultured microorganisms

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CD-HIT Suite: a web server for clustering and comparing biological sequences

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The Nonconcept of Species Diversity: A Critique and Alternative Parameters

21 January 2018

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Accuracy and quality of massively parallel DNA pyrosequencing

21 January 2018

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Standard methods for fungal brood disease research

21 January 2018

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Bacterial diversity in worker adults of Apis mellifera capensis and Apis mellifera scutellata (Insecta: Hymenoptera) assessed using 16S rRNA sequences

21 January 2018

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Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

21 January 2018

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Bifidobacterium actinocoloniiforme sp. nov. and Bifidobacterium bohemicum sp. nov., from the bumblebee digestive tract

21 January 2018

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Probiotic and gut lactobacilli and bifidobacteria: molecular approaches to study diversity and activity

21 January 2018

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Diversity and evolutionary patterns of bacterial gut associates of corbiculate bees

21 January 2018

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Ecological effects on gut bacterial communities in wild bumblebee colonies

21 January 2018

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Gut microbiota instead of host genotype drive the specificity in the interaction of a natural host-parasite system.

21 January 2018

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Cultivation and characterization of the gut symbionts of honey bees and bumble bees: description of Snodgrassella alvi gen. nov., sp. nov., a member of the family Neisseriaceae of the Betaproteobacteria, and Gilliamella apicola gen. nov., sp. nov....

21 January 2018

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The prevalence of parasites and pathogens in Asian honeybees Apis cerana in China

21 January 2018

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probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

21 January 2018

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UniFrac: a new phylogenetic method for comparing microbial communities

21 January 2018

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A simple and distinctive microbiota associated with honey bees and bumble bees.

21 January 2018

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Establishment of characteristic gut bacteria during development of the honeybee worker

21 January 2018

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Characterization of the active microbiotas associated with honey bees reveals healthier and broader communities when colonies are genetically diverse

21 January 2018

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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

21 January 2018

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Environment or kin: whence do bees obtain acidophilic bacteria?

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Specificity between lactobacilli and hymenopteran hosts is the exception rather than the rule.

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Diversity and phylotype consistency of bacteria in the guts of three bee species (Apoidea) at an oilseed rape field.

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Field study results on the probability and risk of a horizontal gene transfer from transgenic herbicide-resistant oilseed rape pollen to gut bacteria of bees

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Distinctive gut microbiota of honey bees assessed using deep sampling from individual worker bees

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Fructophilic Lactobacillus kunkeei and Lactobacillus brevis isolated from fresh flowers, bees and bee-hives.

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

The effect of training set on the classification of honey bee gut microbiota using the Naïve Bayesian Classifier

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Evolutionary relationships of wild hominids recapitulated by gut microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Detection and identification of a novel lactic acid bacterial flora within the honey stomach of the honeybee Apis mellifera

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

21 January 2018

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Multivariate analyses in microbial ecology

21 January 2018

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The Uncultured Microbial Majority

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Independent studies using deep sequencing resolve the same set of core bacterial species dominating gut communities of honey bees

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Evaluating different approaches that test whether microbial communities have the same structure.

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

A high-throughput DNA sequence aligner for microbial ecology studies

21 January 2018

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Assessing and improving methods used in operational taxonomic unit-based approaches for 16S rRNA gene sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

21 January 2018

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A Mathematical Theory of Communication

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Measurement of Diversity

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

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Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats

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New strategies for cultivation and detection of previously uncultured microbes

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

Long-term exposure to antibiotics has caused accumulation of resistance determinants in the gut microbiota of honeybees

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https://api.crossref.org/works/10.3896%2FIBRA.1.52.4.07

A renaissance for the pioneering 16S rRNA gene

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Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging

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Symbionts as major modulators of insect health: lactic acid bacteria and honeybees

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Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

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Evolution and Measurement of Species Diversity

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Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides.

21 January 2018

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Standard methods for virus research inApis mellifera

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Detection and identification of Lactobacillus bacteria found in the honey stomach of the giant honeybee Apis dorsata

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