An Efficient Protocol for NMR-Spectroscopy-Based Structure Determination of Protein Complexes in Solution (Q57912300)

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18 January 2020

title

An efficient protocol for NMR-spectroscopy-based structure determination of protein complexes in solution (English)

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18 January 2020

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1

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18 January 2020

Tobias Madl

2

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18 January 2020

Cameron D Mackereth

3

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18 January 2020

Michael Nilges

4

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18 January 2020

Michael Sattler

5

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18 January 2020

author name string

Cameron D. Mackereth

3

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language of work or name

English

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publication date

1 March 2010

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Angewandte Chemie International Edition

18 January 2020

published in

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18 January 2020

volume

49

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18 January 2020

issue

11

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18 January 2020

page(s)

1967-1970

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Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear overhauser enhancement data and dipolar couplings by rigid body minimization

18 January 2020

cites work

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Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E

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Docking of protein-protein complexes on the basis of highly ambiguous intermolecular distance restraints derived from 1H/15N chemical shift mapping and backbone 15N-1H residual dipolar couplings using conjoined rigid body/torsion angle dynamics.

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Various strategies of using residual dipolar couplings in NMR-driven protein docking: application to Lys48-linked di-ubiquitin and validation against 15N-relaxation data

21 January 2018

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Solution structure and dynamics of the complex between cytochrome c and cytochrome c peroxidase determined by paramagnetic NMR

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Visualization of transient encounter complexes in protein-protein association.

21 January 2018

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An efficient strategy for the determination of the three-dimensional architecture of ribonucleoprotein complexes by the combination of a few easily accessible NMR and biochemical data: intermolecular recognition in a U4 spliceosomal complex

21 January 2018

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Accurate solution structures of proteins from X-ray data and a minimal set of NMR data: calmodulin-peptide complexes as examples

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Protein structure determination from NMR chemical shifts

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Consistent blind protein structure generation from NMR chemical shift data

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Extending the size of protein-RNA complexes studied by nuclear magnetic resonance spectroscopy

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Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65))

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Structural basis for polypyrimidine tract recognition by the essential pre-mRNA splicing factor U2AF65.

21 January 2018

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Refinement of local and long-range structural order in theophylline-binding RNA using (13)C-(1)H residual dipolar couplings and restrained molecular dynamics

21 January 2018

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Residual dipolar couplings in structure determination of biomolecules

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Filamentous bacteriophage for aligning RNA, DNA, and proteins for measurement of nuclear magnetic resonance dipolar coupling interactions

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Protein backbone angle restraints from searching a database for chemical shift and sequence homology

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ARIA: automated NOE assignment and NMR structure calculation

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Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase

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AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR

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Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data

21 January 2018

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Protein global fold determination using site-directed spin and isotope labeling

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21 January 2018

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Determination of the solution-bound conformation of an amino acid binding protein by NMR paramagnetic relaxation enhancement: use of a single flexible paramagnetic probe with improved estimation of its sampling space

21 January 2018

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Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes.

21 January 2018

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Ambiguous NOEs and automated NOE assignment

21 January 2018

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Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data

21 January 2018

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A simple genetic algorithm for the optimization of multidomain protein homology models driven by NMR residual dipolar coupling and small angle X-ray scattering data.

21 January 2018

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A structure refinement protocol combining NMR residual dipolar couplings and small angle scattering restraints

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Magnetic susceptibility in paramagnetic NMR

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21 January 2018

Identifiers

DOI

10.1002/ANIE.200906147

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20148424%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

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