Reconstitution reveals Ykt6 as the autophagosomal SNARE in autophagosome-vacuole fusion (Q58793033)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097514%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

title

Reconstitution reveals Ykt6 as the autophagosomal SNARE in autophagosome-vacuole fusion (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097514%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

1 reference

1

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17 April 2020

Claudine Kraft

7

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17 April 2020

author name string

Daniel Papinski

2

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17 April 2020

Mariya Licheva

3

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17 April 2020

Raffaela Torggler

4

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17 April 2020

Sabrina Rohringer

5

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17 April 2020

Martina Schuschnig

6

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17 April 2020

language of work or name

English

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publication date

10 August 2018

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17 April 2020

published in

Journal of Cell Biology

1 reference

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17 April 2020

volume

217

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17 April 2020

issue

10

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17 April 2020

page(s)

3656-3669

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Creative Commons Attribution 4.0 International

17 April 2020

copyright license

start time

20 November 2019

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC6168255/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

A novel in vitro assay reveals SNARE topology and the role of Ykt6 in autophagosome fusion with vacuoles

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Non-canonical role of the SNARE protein Ykt6 in autophagosome-lysosome fusion.

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Molecular mechanism to target the endosomal Mon1-Ccz1 GEF complex to the pre-autophagosomal structure.

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A cascade of multiple proteins and lipids catalyzes membrane fusion

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Two Independent Pathways within Selective Autophagy Converge to Activate Atg1 Kinase at the Vacuole.

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Improved reconstitution of yeast vacuole fusion with physiological SNARE concentrations reveals an asymmetric Rab(GTP) requirement

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The Atg17-Atg31-Atg29 complex and Atg11 regulate autophagosome-vacuole fusion

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ATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes

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30 November 2018

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At the end of the autophagic road: an emerging understanding of lysosomal functions in autophagy.

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Atg38 is required for autophagy-specific phosphatidylinositol 3-kinase complex integrity

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The hairpin-type tail-anchored SNARE syntaxin 17 targets to autophagosomes for fusion with endosomes/lysosomes

30 November 2018

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Binding of the Atg1/ULK1 kinase to the ubiquitin-like protein Atg8 regulates autophagy

30 November 2018

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Autophagosome biogenesis requires SNAREs

30 November 2018

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30 November 2018

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HOPS drives vacuole fusion by binding the vacuolar SNARE complex and the Vam7 PX domain via two distinct sites

30 November 2018

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The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog Ypt7.

30 November 2018

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Identification of two evolutionarily conserved genes regulating processing of engulfed apoptotic cells

30 November 2018

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30 November 2018

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30 November 2018

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Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease

30 November 2018

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Atg9 sorting from mitochondria is impaired in early secretion and VFT-complex mutants in Saccharomyces cerevisiae

30 November 2018

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30 November 2018

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30 November 2018

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Analysis of Sec22p in endoplasmic reticulum/Golgi transport reveals cellular redundancy in SNARE protein function

30 November 2018

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Ccz1p/Aut11p/Cvt16p is essential for autophagy and the cvt pathway

30 November 2018

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Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion

30 November 2018

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30 November 2018

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Two distinct Vps34 phosphatidylinositol 3-kinase complexes function in autophagy and carboxypeptidase Y sorting in Saccharomyces cerevisiae

30 November 2018

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Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells

30 November 2018

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A Ypt/Rab effector complex containing the Sec1 homolog Vps33p is required for homotypic vacuole fusion

30 November 2018

1 reference

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Cytoplasm to vacuole trafficking of aminopeptidase I requires a t-SNARE-Sec1p complex composed of Tlg2p and Vps45p

30 November 2018

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Formation process of autophagosome is traced with Apg8/Aut7p in yeast

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Three v-SNAREs and two t-SNAREs, present in a pentameric cis-SNARE complex on isolated vacuoles, are essential for homotypic fusion.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

The Saccharomyces cerevisiae v-SNARE Vti1p is required for multiple membrane transport pathways to the vacuole

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Apg7p/Cvt2p is required for the cytoplasm-to-vacuole targeting, macroautophagy, and peroxisome degradation pathways

30 November 2018

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Conserved structural features of the synaptic fusion complex: SNARE proteins reclassified as Q- and R-SNAREs

30 November 2018

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Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

30 November 2018

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Apg14p and Apg6/Vps30p form a protein complex essential for autophagy in the yeast, Saccharomyces cerevisiae

30 November 2018

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Vam7p, a SNAP-25-like molecule, and Vam3p, a syntaxin homolog, function together in yeast vacuolar protein trafficking

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

EEA1 links PI(3)K function to Rab5 regulation of endosome fusion

30 November 2018

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Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast

30 November 2018

1 reference

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Characterization of a novel yeast SNARE protein implicated in Golgi retrograde traffic

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

A novel RING finger protein complex essential for a late step in protein transport to the yeast vacuole

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

A multispecificity syntaxin homologue, Vam3p, essential for autophagic and biosynthetic protein transport to the vacuole

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Aminopeptidase I is targeted to the vacuole by a nonclassical vesicular mechanism

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Ykt6p, a prenylated SNARE essential for endoplasmic reticulum-Golgi transport

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Phosphatidylinositol 3-kinase encoded by yeast VPS34 gene essential for protein sorting

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

A rab protein is required for the assembly of SNARE complexes in the docking of transport vesicles

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Isolation and characterization of yeast mutants in the cytoplasm to vacuole protein targeting pathway

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Possible role for fatty acyl-coenzyme A in intracellular protein transport

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168255

Purification and in vitro analysis of yeast vacuoles

30 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/30097514

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Autophagosomal YKT6 is required for fusion with lysosomes independently of syntaxin 17.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/30097514

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1083/JCB.201804028

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097514%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097514%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

PubMed publication ID

30097514

1 reference