Characterization of amplicons in neuroblastoma: High-resolution mapping using DNA microarrays, relationship with outcome, and identification of overexpressed genes (Q60035712)

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English	Characterization of amplicons in neuroblastoma: High-resolution mapping using DNA microarrays, relationship with outcome, and identification of overexpressed genes	article

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9 January 2020

Characterization of amplicons in neuroblastoma: high-resolution mapping using DNA microarrays, relationship with outcome, and identification of overexpressed genes (English)

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9 January 2020

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Olivier Delattre

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Isabelle Janoueix-Lerosey

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Gudrun Schleiermacher

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Gudrun Schleiermacher

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Delphine Lequin

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Delphine Lequin

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Gaëlle Pierron

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Agnès Ribeiro

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Carlo Lucchesi

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Anne Fix

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1 October 2008

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Genes, Chromosomes and Cancer

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819-834

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9 January 2020

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Neuroblastoma: biological insights into a clinical enigma

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7 January 2021

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High-resolution analysis of allelic imbalance in neuroblastoma cell lines by single nucleotide polymorphism arrays

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cDNA array-CGH profiling identifies genomic alterations specific to stage and MYCN-amplification in neuroblastoma

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Initiation of the breakage-fusion-bridge mechanism through common fragile site activation in human breast cancer cells: the model of PIP gene duplication from a break at FRA7I

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A Coefficient of Agreement for Nominal Scales

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MYCN is retained in single copy at chromosome 2 band p23-24 during amplification in human neuroblastoma cells

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No Evidence for Correlation of DDX1 Gene Amplification With Improved Survival Probability in Patients With MYCN-Amplified Neuroblastomas

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High-resolution mapping of amplicons of the short arm of chromosome 1 in two neuroblastoma tumors by microarray-based comparative genomic hybridization.

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Genome-wide analysis of neuroblastomas using high-density single nucleotide polymorphism arrays

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Two types of chromosome 1p losses with opposite significance in gliomas.

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Gene expression profiling of 1p35-36 genes in neuroblastoma

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Preferential occurrence of chromosome breakpoints within early replicating regions in neuroblastoma

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Coamplification of the L-myc and N-myc oncogenes in a neuroblastoma cell line

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Relationship of DDX1 and NAG gene amplification/overexpression to the prognosis of patients with MYCN-amplified neuroblastoma

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VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles

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Comprehensive genetic and histopathologic study reveals three types of neuroblastoma tumors.

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Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data.

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Molecular biology of neuroblastoma

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ArrayCGH-based classification of neuroblastoma into genomic subgroups

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Rearrangements and increased expression of cyclin D1 (CCND1) in neuroblastoma

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High-resolution detection and mapping of genomic DNA alterations in neuroblastoma

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7 January 2021

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Neuroblastomas have distinct genomic DNA profiles that predict clinical phenotype and regional gene expression

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7 January 2021

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Spatial normalization of array-CGH data

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N-myc oncogene RNA expression in neuroblastoma

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Biological role of anaplastic lymphoma kinase in neuroblastoma

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Amplification of oncogenes revisited: from expression profiling to clinical application

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Combined 24-color karyotyping and comparative genomic hybridization analysis indicates predominant rearrangements of early replicating chromosome regions in neuroblastoma

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Variety and complexity of chromosome 17 translocations in neuroblastoma

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Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH.

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The MEIS1 oncogene is highly expressed in neuroblastoma and amplified in cell line IMR32

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Oligonucleotide array-based comparative genomic hybridization (aCGH) of 90 neuroblastomas reveals aberration patterns closely associated with relapse pattern and outcome

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High-resolution analysis of chromosomal breakpoints and genomic instability identifies PTPRD as a candidate tumor suppressor gene in neuroblastoma

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Recent progress in understanding mechanisms of mammalian DNA amplification

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Positional gene expression analysis identifies 12q overexpression and amplification in a subset of neuroblastomas

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Translocation-excision-deletion-amplification mechanism leading to nonsyntenic coamplification of MYC and ATBF1.

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Unequivocal delineation of clinicogenetic subgroups and development of a new model for improved outcome prediction in neuroblastoma

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Integrative genomics identifies distinct molecular classes of neuroblastoma and shows that multiple genes are targeted by regional alterations in DNA copy number

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based on heuristic

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Coamplification of DDX1 correlates with an improved survival probability in children with MYCN-amplified human neuroblastoma.

1 reference

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A Model-Based Background Adjustment for Oligonucleotide Expression Arrays

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10.1002/GCC.20583

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9 January 2020

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9 January 2020

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