A sequence-based, deep learning model accurately predicts RNA splicing branchpoints (Q64122110)

12 December 2020

Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A

1 reference

12 December 2020

The branchpoint residue is recognized during commitment complex formation before being bulged out of the U2 snRNA-pre-mRNA duplex

1 reference

12 December 2020

Long short-term memory

1 reference

12 December 2020

A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition

1 reference

12 December 2020

Recognition of RNA branch point sequences by the KH domain of splicing factor 1 (mammalian branch point binding protein) in a splicing factor complex

1 reference

12 December 2020

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

1 reference

12 December 2020

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

1 reference

12 December 2020

Detection of nonneutral substitution rates on mammalian phylogenies

1 reference

12 December 2020

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

1 reference

12 December 2020

Analysis and design of RNA sequencing experiments for identifying isoform regulation

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12 December 2020

Genome-wide association between branch point properties and alternative splicing

1 reference

12 December 2020

Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes

1 reference

12 December 2020

Efficient internal exon recognition depends on near equal contributions from the 3' and 5' splice sites.

1 reference

12 December 2020

The genomic signature of splicing-coupled selection differs between long and short introns.

1 reference

12 December 2020

Pseudouridines in spliceosomal snRNAs

1 reference

12 December 2020

The spliceosome: a flexible, reversible macromolecular machine

1 reference

12 December 2020

Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo

1 reference

12 December 2020

The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine

1 reference

12 December 2020

The contribution of pseudouridine to stabilities and structure of RNAs

1 reference

12 December 2020

RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease

1 reference

12 December 2020

Genome-wide discovery of human splicing branchpoints

1 reference

12 December 2020

Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans

1 reference

12 December 2020

ClinVar: public archive of interpretations of clinically relevant variants

1 reference

12 December 2020

Cancer-associated SF3B1 mutations affect alternative splicing by promoting alternative branchpoint usage

1 reference

12 December 2020

αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome

1 reference

12 December 2020

Cryo-EM structure of the spliceosome immediately after branching

1 reference

12 December 2020

Identification of new branch points and unconventional introns in Saccharomyces cerevisiae

1 reference

12 December 2020

Analysis of protein-coding genetic variation in 60,706 humans

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12 December 2020

Cryo-EM structure of a human spliceosome activated for step 2 of splicing

1 reference

12 December 2020

Large-scale analysis of branchpoint usage across species and cell lines

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12 December 2020

Corrigendum: Splicing factor 1 modulates dietary restriction and TORC1 pathway longevity in C. elegans

1 reference

12 December 2020

Machine learning annotation of human branchpoints.

1 reference

12 December 2020