Role of the Reverse Transcriptase, Nucleocapsid Protein, and Template Structure in the Two-step Transfer Mechanism in Retroviral Recombination (Q73514283)

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scientific article published on 11 June 2003

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English	Role of the Reverse Transcriptase, Nucleocapsid Protein, and Template Structure in the Two-step Transfer Mechanism in Retroviral Recombination	scientific article published on 11 June 2003

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4 November 2019

Role of the Reverse Transcriptase, Nucleocapsid Protein, and Template Structure in the Two-step Transfer Mechanism in Retroviral Recombination (English)

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4 November 2019

Robert J Gorelick

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Robert J Gorelick

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Ricardo H Roda

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Mini Balakrishnan

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Mark N Hanson

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Birgitta M Wohrl

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Stuart F J Le Grice

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Bernard P Roques

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Robert A Bambara

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Journal of Biological Chemistry

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31536-31546

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4 November 2019

Genetic recombination between avian leukosis and sarcoma viruses Experimental variables and the frequencies of recombination

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Genetic recombination with avian tumor virus

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Genetically stable reassortment of markers during mixed infection with avian tumor viruses

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Genetic consequences of packaging two RNA genomes in one retroviral particle: pseudodiploidy and high rate of genetic recombination

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Retroviral Recombination and Reverse Transcription

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High rate of recombination throughout the human immunodeficiency virus type 1 genome

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The nature of human immunodeficiency virus type 1 strand transfers

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Identification of endogenous retroviral sequences as potential donors for recombinational repair of mutant retroviruses: positions of crossover points

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Forced integration of Moloney murine leukemia virus DNA with a mutant integration site occurs through recombination with VL30 DNA.

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K65R mutation of human immunodeficiency virus type 1 reverse transcriptase encodes cross-resistance to 9-(2-phosphonylmethoxyethyl)adenine

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Retrovirus variation and reverse transcription: abnormal strand transfers result in retrovirus genetic variation

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A detailed model of reverse transcription and tests of crucial aspects

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Retroviral recombination during reverse transcription

1 reference

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Most retroviral recombinations occur during minus-strand DNA synthesis

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Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: substitutions, frameshifts, and hypermutations

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Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: deletions and deletions with insertions

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Structure-based moloney murine leukemia virus reverse transcriptase mutants with altered intracellular direct-repeat deletion frequencies

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Structural determinants of murine leukemia virus reverse transcriptase that affect the frequency of template switching

1 reference

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Rate and mechanism of nonhomologous recombination during a single cycle of retroviral replication.

1 reference

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Role of murine leukemia virus reverse transcriptase deoxyribonucleoside triphosphate-binding site in retroviral replication and in vivo fidelity.

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Genetic recombination in avian retroviruses

1 reference

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21 January 2018

Structure, Replication, and Recombination of Retrovirus Genomes: Some Unifying Hypotheses

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Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates

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RNA-dependent DNA polymerase in virions of RNA tumour viruses

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Viral RNA-dependent DNA Polymerase: RNA-dependent DNA Polymerase in Virions of Rous Sarcoma Virus

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21 January 2018

Mechanism of DNA Strand Transfer Reactions Catalyzed by HIV-1 Reverse Transcriptase

1 reference

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21 January 2018

The mechanism of retroviral recombination: the role of sequences proximal to the point of strand transfer

1 reference

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21 January 2018

RNase H activity is required for high-frequency repeat deletion during Moloney murine leukemia virus replication

1 reference

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21 January 2018

Dynamic copy choice: steady state between murine leukemia virus polymerase and polymerase-dependent RNase H activity determines frequency of in vivo template switching

1 reference

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Structural features in the HIV-1 repeat region facilitate strand transfer during reverse transcription

1 reference

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21 January 2018

Evidence for a unique mechanism of strand transfer from the transactivation response region of HIV-1

1 reference

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21 January 2018

The HIV-1 repeated sequence R as a robust hot-spot for copy-choice recombination

1 reference

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21 January 2018

Evidence for a mechanism of recombination during reverse transcription dependent on the structure of the acceptor RNA

1 reference

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Copy-choice recombination by reverse transcriptases: reshuffling of genetic markers mediated by RNA chaperones

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Mechanisms of retroviral recombination

1 reference

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Retroviral recombination: what drives the switch?

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Strand transfer occurs in retroviruses by a pause-initiated two-step mechanism

1 reference

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The kissing hairpin sequence promotes recombination within the HIV-I 5' leader region.

1 reference

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21 January 2018

Template dimerization promotes an acceptor invasion-induced transfer mechanism during human immunodeficiency virus type 1 minus-strand synthesis

1 reference

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21 January 2018

Pausing of reverse transcriptase on retroviral RNA templates is influenced by secondary structures both 5' and 3' of the catalytic site

1 reference

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21 January 2018

Recombination during reverse transcription: an evaluation of the role of the nucleocapsid protein

1 reference

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First glimpses at structure-function relationships of the nucleocapsid protein of retroviruses

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Recombinant HIV-1 nucleocapsid protein accelerates HIV-1 reverse transcriptase catalyzed DNA strand transfer reactions and modulates RNase H activity

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Human immunodeficiency virus nucleocapsid protein stimulates strand transfer from internal regions of heteropolymeric RNA templates

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Influence of human immunodeficiency virus nucleocapsid protein on synthesis and strand transfer by the reverse transcriptase in vitro

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Actinomycin D inhibition of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase and nucleocapsid protein

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Kinetic analysis of the effect of HIV nucleocapsid protein (NCp) on internal strand transfer reactions

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The catalytic properties of the reverse transcriptase of the lentivirus equine infectious anemia virus

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Involvement of C-terminal structural elements of equine infectious anemia virus reverse transcriptase in DNA polymerase and ribonuclease H activities

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First large scale chemical synthesis of the 72 amino acid HIV-1 nucleocapsid protein NCp7 in an active form.

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Role of methionine 184 of human immunodeficiency virus type-1 reverse transcriptase in the polymerase function and fidelity of DNA synthesis.

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Unique progressive cleavage mechanism of HIV reverse transcriptase RNase H

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Substrate requirements for secondary cleavage by HIV-1 reverse transcriptase RNase H.

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Inhibition of HIV-1 reverse transcriptase-catalyzed DNA strand transfer reactions by 4-chlorophenylhydrazone of mesoxalic acid

1 reference

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Viral RNA annealing activities of human immunodeficiency virus type 1 nucleocapsid protein require only peptide domains outside the zinc fingers

1 reference

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RNA chaperones and the RNA folding problem

1 reference

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Viral RNA annealing activities of the nucleocapsid protein of Moloney murine leukemia virus are zinc independent

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HIV-1 nucleocapsid protein as a nucleic acid chaperone: spectroscopic study of its helix-destabilizing properties, structural binding specificity, and annealing activity

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Nucleic acid conformational changes essential for HIV-1 nucleocapsid protein-mediated inhibition of self-priming in minus-strand transfer

1 reference

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Destabilization of the HIV-1 complementary sequence of TAR by the nucleocapsid protein through activation of conformational fluctuations

1 reference

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HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence

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10.1074/JBC.M304608200

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4 November 2019

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Europe PubMed Central

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4 November 2019

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